DRSC/TRiP Functional Genomics Resources

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Protein Alignment kek4 and Lrrn3

DIOPT Version :10

Sequence 1:NP_609615.2 Gene:kek4 / 34718 FlyBaseID:FBgn0032484 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_110483.2 Gene:Lrrn3 / 81514 RGDID:71066 Length:707 Species:Rattus norvegicus


Alignment Length:817 Identity:157/817 - (19%)
Similarity:258/817 - (31%) Gaps:317/817 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LKHLSLFLFKIYCLALIFRSASADWLLDCGN-CHCK---WNSGKK------TADCRNLSLSGVPE 68
            :|...|.:..:..||:.....:.|..:||.. |.|:   |.:.:.      |.||.:|.|...|.
  Rat     1 MKDAPLQIHVLLGLAITALVQAGDKKVDCPQLCTCEIRPWFTPRSIYMEALTVDCNDLGLLNFPA 65

  Fly    69 YLSPEVQV-----------------------LDLSHNHI----------------FYLEENAFLT 94
            .|..:.|:                       ||||.|::                .|||||. ||
  Rat    66 RLPADTQILLLQTNNIARIEHSTDFPVNLTGLDLSQNNLSSVTNINVQKMSQLLSVYLEENK-LT 129

  Fly    95 T-------HLQNLQKLLIRNGTLKYLNQRSFTQLQILIELDLSNNLL-------VDLLPNV---- 141
            .       .|.|||:|.:.:..|..::..:|..|..|:.|.|::|.|       .:.|||:    
  Rat   130 ELPEKCLYGLSNLQELYVNHNLLSAISPGAFVGLHNLLRLHLNSNRLQMINSKWFEALPNLEILM 194

  Fly   142 -------------FDCLSKVRAIF----------------------------------------- 152
                         |..|.|:|::.                                         
  Rat   195 LGDNPILRIKDMNFQPLLKLRSLVIAGINLTEVPGDALVGLENLESISFYDNRLNKVPQVALQKA 259

  Fly   153 -------LNGNLLQALRHGVFRNLKY-------------------------LHKIELKRN-RLVS 184
                   ||.|.:..:|.|.|.|:.:                         |.|||...| ||..
  Rat   260 VNLKFLDLNKNPINRIRRGDFSNMLHLKELGINNMPELVSIDSLAVDNLPDLRKIEATNNPRLSY 324

  Fly   185 IDAKAFVGVPLLSQIYLDNNELTKLRVESFQDLTKLTALSLVENPWNCTCDLQMFRDFVIGMN-- 247
            |...||..:|.|..:.|::|.|:.|...:.:.|..|..:|:..||..|.|.::.     |.||  
  Rat   325 IHPNAFFRLPKLESLMLNSNALSALYHGTIESLPNLKEISIHSNPIRCDCVIRW-----INMNKT 384

  Fly   248 --LYTPPTS--CHYPLQLRG----RLWIEDQPEAFACKPKIVYPTLSTSINTSKEN-VTLICRVH 303
              .:..|.|  |..|.:.:|    ::...|..|  .|.|.|...:..:.::...:: |:|.||..
  Rat   385 NIRFMEPDSLFCVDPPEFQGQNVRQVHFRDMME--ICLPLIAPESFPSILDVEADSYVSLHCRAT 447

  Fly   304 GSPNTVIAWDYTNQVYESRSKPVKSLQKQRIYIELLREDESKIRKFGHDVFVSRLTIVNARKSDE 368
            ..|...|.|     :..|..:.:.:..:::.|:              |.  ...|.|......:.
  Rat   448 AEPQPEIYW-----ITPSGKRLLPNTLREKFYV--------------HS--EGTLDIRGITPKEG 491

  Fly   369 GVYTCLAENPGGKDSVHISVVVQKDMERISLIDSNFFAIVCLIAMGFLSMSILFSLVTCLIFKRF 433
            |:|||:|.|..|.|...|.:.|...:.:    |:|          |.|::.|             
  Rat   492 GLYTCIATNLVGADLKSIMIKVGGFVPQ----DNN----------GSLNIKI------------- 529

  Fly   434 KQFHPGQHTYLQPTSLPVQSPGSEEATAISALSSGVIRESKIVLDPLSAINEPSNKNYTLF-KTS 497
                                   .:..|.|.|.|.. ..|||:         .|:..:|.| ||.
  Rat   530 -----------------------RDIRANSVLVSWK-ANSKIL---------KSSVKWTAFVKTE 561

  Fly   498 NSNGSEYMHTRNYKDVRLNSNTYTENLDNQAES-----------ISSRNRELYSNIAGDREKEEL 551
            :|..::        ..|:.|:....||.:...|           |..::|:...|:.        
  Rat   562 DSQAAQ--------SARIPSDVKVYNLTHLKPSTEYKICIDIPTIYQKSRKQCVNVT-------- 610

  Fly   552 KQKDELDKDSRQSSLQST-------------------GCSRKKGQIDELQPDLLPSTQPTALKNI 597
              ...|:.|.:::....|                   ||..::|..:....           ..:
  Rat   611 --TKSLEHDGKENGKSHTVFVACVGGLLGIIGVMCLFGCVSQEGNCESEHS-----------YTV 662

  Fly   598 NETFGPSAKKAEVNPRSKYNTNVQKYLKEKYGSVRIK 634
            |....|:...:|:.|..   .|:.:..|||..|:.:|
  Rat   663 NHCHKPTLAFSELYPPL---INLWESSKEKPASLEVK 696

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek4NP_609615.2 LRR 59..>228 CDD:443914 63/312 (20%)
leucine-rich repeat 75..99 CDD:275380 14/69 (20%)
LRR_8 98..158 CDD:404697 22/131 (17%)
leucine-rich repeat 100..123 CDD:275380 6/22 (27%)
leucine-rich repeat 124..147 CDD:275380 10/46 (22%)
leucine-rich repeat 148..171 CDD:275380 8/70 (11%)
leucine-rich repeat 172..195 CDD:275380 10/23 (43%)
leucine-rich repeat 196..219 CDD:275380 6/22 (27%)
LRRCT 228..277 CDD:214507 14/58 (24%)
IG_like 294..390 CDD:214653 21/96 (22%)
Ig strand B 296..300 CDD:409353 2/3 (67%)
Ig strand C 309..323 CDD:409353 3/13 (23%)
Ig strand E 356..360 CDD:409353 1/3 (33%)
Ig strand F 370..375 CDD:409353 3/4 (75%)
Ig strand G 383..386 CDD:409353 0/2 (0%)
Lrrn3NP_110483.2 LRRNT 28..72 CDD:214470 12/43 (28%)
LRR 1 70..91 1/20 (5%)
leucine-rich repeat 72..93 CDD:275380 1/20 (5%)
LRR 76..>370 CDD:443914 59/294 (20%)
LRR 2 93..114 5/20 (25%)
leucine-rich repeat 94..117 CDD:275380 5/22 (23%)
LRR 3 117..138 7/21 (33%)
leucine-rich repeat 118..141 CDD:275380 8/23 (35%)
LRR 4 141..162 6/20 (30%)
leucine-rich repeat 142..165 CDD:275380 6/22 (27%)
LRR 5 165..186 5/20 (25%)
leucine-rich repeat 166..189 CDD:275380 6/22 (27%)
LRR 6 189..210 2/20 (10%)
leucine-rich repeat 190..213 CDD:275380 2/22 (9%)
LRR 7 213..234 2/20 (10%)
leucine-rich repeat 214..237 CDD:275380 1/22 (5%)
LRR 8 237..258 0/20 (0%)
leucine-rich repeat 238..261 CDD:275380 0/22 (0%)
LRR 9 261..282 6/20 (30%)
leucine-rich repeat 262..285 CDD:275380 7/22 (32%)
LRR 10 285..304 0/18 (0%)
leucine-rich repeat 286..310 CDD:275380 0/23 (0%)
LRR 11 310..332 10/21 (48%)
leucine-rich repeat 311..333 CDD:275380 10/21 (48%)
LRR 12 335..358 5/22 (23%)
leucine-rich repeat 336..359 CDD:275378 6/22 (27%)
PCC 341..>405 CDD:188093 18/68 (26%)
leucine-rich repeat 360..372 CDD:275378 4/11 (36%)
Ig 440..513 CDD:472250 21/93 (23%)
Ig strand B 440..444 CDD:409353 2/3 (67%)
Ig strand C 453..457 CDD:409353 2/8 (25%)
Ig strand E 479..483 CDD:409353 1/3 (33%)
Ig strand F 493..498 CDD:409353 3/4 (75%)
Ig strand G 506..509 CDD:409353 0/2 (0%)
fn3 526..593 CDD:394996 19/120 (16%)

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