DRSC/TRiP Functional Genomics Resources

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Protein Alignment kek4 and slit2

DIOPT Version :9

Sequence 1:NP_001260435.1 Gene:kek4 / 34718 FlyBaseID:FBgn0032484 Length:649 Species:Drosophila melanogaster
Sequence 2:XP_021331524.1 Gene:slit2 / 80353 ZFINID:ZDB-GENE-010306-3 Length:1551 Species:Danio rerio


Alignment Length:517 Identity:121/517 - (23%)
Similarity:200/517 - (38%) Gaps:108/517 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LFLFKIYCLALIFRSASADWLLDC-GNCHCKWNSGKKTADCRNLSLSGVPEYLSPEVQVLDLSHN 82
            :|:.|...|..:...|.|.   .| ..|.|   || ...||...||..||..:...|:.|||:.|
Zfish     1 MFVLKSVVLCALLCGAGAQ---SCPSQCSC---SG-TAVDCHGQSLRSVPRNIPRNVERLDLNAN 58

  Fly    83 HIFYLEENAFLTTHLQNLQKLLIRNGTLKYLNQRSFTQLQILIELDLSNNLLVDLLPNVFDCLSK 147
            ::..:.:..|  ..|:||:.|.:....:..:.:.:|..||.|..|.|:.|.|..|...:|...:|
Zfish    59 NLTKITKADF--AGLKNLRVLQLMENKISSIERGAFQDLQELERLRLNRNNLQVLPELLFLGTTK 121

  Fly   148 VRAIFLNGNLLQALRHGVFRNLKYLHKIELKRNRLVSIDAKAFVGVPLLSQIYLDNNELTKLRVE 212
            :..:.|:.|.:|.:....||....:..::|..|::..|:..||..:..|..:.|:||.:::|.|.
Zfish   122 LFRLDLSENQIQGIPRKAFRGSTEIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNISRLSVA 186

  Fly   213 SFQDLTKLTALSLVENPWNCTCDLQMFRDFV---IGMNLYTPPTSCHYPLQLRGRLWIEDQPEAF 274
            ||..:.||....|..|...|.|::....|::   ..:.||   |.|..|..|||....|.|.:.|
Zfish   187 SFNHMPKLRTFRLHSNNLLCDCNVAWLSDWLRQRPRLGLY---TQCMAPPSLRGHNIAEVQKKEF 248

  Fly   275 ACKPKIVYPTLSTSIN--------TSKENVTLICRVHGSPNTVIAWDYTNQVYESRSK------- 324
            .|......|...:|.:        |...|| :.||  |...|.|..:....:.|.|.:       
Zfish   249 MCTDFSEGPQSHSSCSVLQCPELCTCSNNV-VDCR--GKGLTEIPTNLPETITEIRLEQNSIKII 310

  Fly   325 ------PVKSLQK----QRIYIELLREDESKIRK------FGHDV-----------FVSRLTIVN 362
                  |.|.|::    .....||..:....:|.      :|:.:           |..:|.::|
Zfish   311 PAGAFAPYKRLRRIDLSNNQITELASDSFQGLRSLNSLVLYGNKITELPKGLFDGLFSLQLLLLN 375

  Fly   363 ARKSDEGVYTCLAENPGGKDSVHISVVVQKDMERISLIDSNFFAIVCLIAMGFLSMSILFSLVTC 427
            |.|     ..||.     .||.       :|::.::|: |.:...:..||.|..|.         
Zfish   376 ANK-----INCLR-----VDSF-------QDLQNLNLL-SLYDNKLQTIAKGTFSS--------- 413

  Fly   428 LIFKRFKQFHPGQH------------TYLQPTSLPVQSPGSEEATAISALSS---GVIRESK 474
              .:..:..|..|:            .|||..  |:::.|: ..|:...|::   |.|:..|
Zfish   414 --LRAIQTLHLAQNPFMCDCHLKWLADYLQDN--PIETSGA-RCTSPRRLANKRIGQIKSKK 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek4NP_001260435.1 leucine-rich repeat 75..99 CDD:275380 6/23 (26%)
LRR_8 99..158 CDD:290566 16/58 (28%)
leucine-rich repeat 100..123 CDD:275380 4/22 (18%)
leucine-rich repeat 124..147 CDD:275380 7/22 (32%)
LRR_8 146..206 CDD:290566 15/59 (25%)
leucine-rich repeat 148..171 CDD:275380 5/22 (23%)
leucine-rich repeat 172..195 CDD:275380 5/22 (23%)
leucine-rich repeat 196..219 CDD:275380 8/22 (36%)
TPKR_C2 228..277 CDD:301599 15/51 (29%)
IG_like 294..390 CDD:214653 25/129 (19%)
Ig 296..387 CDD:143165 24/124 (19%)
slit2XP_021331524.1 LRRNT 21..51 CDD:214470 11/33 (33%)
leucine-rich repeat 32..49 CDD:275380 6/16 (38%)
LRR_8 48..108 CDD:316378 17/61 (28%)
leucine-rich repeat 50..73 CDD:275380 7/24 (29%)
leucine-rich repeat 74..97 CDD:275380 4/22 (18%)
LRR_8 97..156 CDD:316378 15/58 (26%)
leucine-rich repeat 98..121 CDD:275380 7/22 (32%)
leucine-rich repeat 122..145 CDD:275380 5/22 (23%)
LRR_8 144..204 CDD:316378 17/59 (29%)
leucine-rich repeat 146..169 CDD:275380 5/22 (23%)
leucine-rich repeat 170..193 CDD:275380 8/22 (36%)
PCC 175..>237 CDD:188093 20/64 (31%)
leucine-rich repeat 194..320 CDD:275380 31/131 (24%)
LRRNT 267..299 CDD:214470 8/34 (24%)
LRR_8 298..355 CDD:316378 9/56 (16%)
leucine-rich repeat 321..344 CDD:275380 3/22 (14%)
leucine-rich repeat 345..365 CDD:275380 1/19 (5%)
LRR_8 375..427 CDD:316378 16/80 (20%)
leucine-rich repeat 393..416 CDD:275380 6/34 (18%)
PCC 398..>461 CDD:188093 13/76 (17%)
LRRNT 507..537 CDD:214470
leucine-rich repeat 517..535 CDD:275380
leucine-rich repeat 539..561 CDD:275380
LRR_8 560..620 CDD:316378
leucine-rich repeat 562..585 CDD:275380
leucine-rich repeat 586..609 CDD:275380
LRR_8 609..668 CDD:316378
leucine-rich repeat 610..633 CDD:275380
leucine-rich repeat 634..657 CDD:275380
PCC 639..>716 CDD:188093
leucine-rich repeat 658..780 CDD:275380
leucine-rich repeat 677..728 CDD:275380
NEL <698..>863 CDD:330839
leucine-rich repeat 736..757 CDD:275380
LRR_8 780..839 CDD:316378
leucine-rich repeat 781..804 CDD:275380
leucine-rich repeat 805..828 CDD:275380
leucine-rich repeat 829..850 CDD:275380
PCC 834..>1026 CDD:188093
EGF 1015..1042 CDD:306513
EGF_CA 1060..1096 CDD:238011
EGF_CA 1098..1134 CDD:238011
Laminin_G_2 1210..1338 CDD:308045
GHB_like 1489..1550 CDD:328788
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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