DRSC/TRiP Functional Genomics Resources

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Protein Alignment kek4 and slit1a

DIOPT Version :10

Sequence 1:NP_609615.2 Gene:kek4 / 34718 FlyBaseID:FBgn0032484 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_001030140.1 Gene:slit1a / 556123 ZFINID:ZDB-GENE-030722-3 Length:1524 Species:Danio rerio


Alignment Length:345 Identity:84/345 - (24%)
Similarity:137/345 - (39%) Gaps:65/345 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 DCGN-------CHCKWNSGKKTADCRNLSLSGVPEYLSPEVQVLDLSHNHIFYLEE-NAFLT-TH 96
            ||.|       |.|:.|    ..||.||.|..:||::........|::|.|..:|. .||.| ||
Zfish   499 DCNNDPVCPAKCRCESN----VVDCSNLRLDRIPEHVPASTTEPRLNNNEITTIEAMGAFKTLTH 559

  Fly    97 LQNLQKLLIRNGTLKYLNQRSFTQLQILIELDLSNNLLVDLLPNVFDCLSKVRAIFLNGNLLQAL 161
            |:                           :::||||.:.::....|:..|.|..:.|..|.|...
Zfish   560 LK---------------------------KINLSNNKISEIEDGAFEGASSVNELHLTANQLDLA 597

  Fly   162 RHGVFRNLKYLHKIELKRNRLVSIDAKAFVGVPLLSQIYLDNNELTKLRVESFQDLTKLTALSLV 226
            ..|:||.|:.|..:.|:.||:..|...:|.|:..:..:.|.:|.||.:...:|..|..|:.|:|:
Zfish   598 HSGMFRGLEGLRMLMLRNNRISCIHNNSFTGLHNVRLLSLYDNTLTTIAPGAFDTLQSLSTLNLL 662

  Fly   227 ENPWNCTCDLQMFRDFVIGMNLYTPPTSCHYPLQLR---------GRLWIEDQPEAFACKPKIVY 282
            .||:||.|.|.....::....:.|....||.|..|:         .....||..|..:|.|.:..
Zfish   663 ANPFNCNCRLAWLSSWLRNRKIVTGNPRCHRPAFLKEIPLQDVAAPDFRCEDDHEDVSCAPPVHC 727

  Fly   283 PTLSTSINTSKENVTLICRVH------GSPNTVIAWDYTNQVYESRSKPVKSLQKQRIYIELLRE 341
            |...|.:    |:|......|      |:|..:...........:..|.:.|.:.    ::|:..
Zfish   728 PADCTCL----ESVVRCSNKHLQALPKGTPRNITELYLDGNQLSTVPKELSSFKS----LQLVDL 784

  Fly   342 DESKIRKFGHDVF--VSRLT 359
            ..::|....:..|  :|:||
Zfish   785 SNNRISSLTNSSFTNMSQLT 804

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek4NP_609615.2 LRR 59..>228 CDD:443914 45/170 (26%)
leucine-rich repeat 75..99 CDD:275380 10/25 (40%)
LRR_8 98..158 CDD:404697 9/59 (15%)
leucine-rich repeat 100..123 CDD:275380 0/22 (0%)
leucine-rich repeat 124..147 CDD:275380 5/22 (23%)
leucine-rich repeat 148..171 CDD:275380 8/22 (36%)
leucine-rich repeat 172..195 CDD:275380 7/22 (32%)
leucine-rich repeat 196..219 CDD:275380 6/22 (27%)
LRRCT 228..277 CDD:214507 14/57 (25%)
IG_like 294..390 CDD:214653 13/74 (18%)
Ig strand B 296..300 CDD:409353 1/3 (33%)
Ig strand C 309..323 CDD:409353 0/13 (0%)
Ig strand E 356..360 CDD:409353 3/4 (75%)
Ig strand F 370..375 CDD:409353
Ig strand G 383..386 CDD:409353
slit1aNP_001030140.1 LRR <25..>245 CDD:443914
leucine-rich repeat 36..55 CDD:275380
leucine-rich repeat 56..79 CDD:275380
leucine-rich repeat 80..103 CDD:275380
leucine-rich repeat 104..127 CDD:275380
leucine-rich repeat 128..151 CDD:275380
leucine-rich repeat 152..175 CDD:275380
leucine-rich repeat 176..199 CDD:275380
leucine-rich repeat 200..327 CDD:275380
LRR <282..>454 CDD:443914
leucine-rich repeat 328..351 CDD:275380
leucine-rich repeat 352..372 CDD:275380
leucine-rich repeat 400..423 CDD:275380
leucine-rich repeat 424..521 CDD:275380 8/25 (32%)
LRR 515..>813 CDD:443914 79/329 (24%)
leucine-rich repeat 522..559 CDD:275380 11/36 (31%)
leucine-rich repeat 560..583 CDD:275380 6/49 (12%)
leucine-rich repeat 584..607 CDD:275380 8/22 (36%)
leucine-rich repeat 608..631 CDD:275380 7/22 (32%)
leucine-rich repeat 632..653 CDD:275380 5/20 (25%)
leucine-rich repeat 656..747 CDD:275380 24/94 (26%)
leucine-rich repeat 748..778 CDD:275380 4/29 (14%)
leucine-rich repeat 779..802 CDD:275380 3/22 (14%)
leucine-rich repeat 803..823 CDD:275380 2/2 (100%)
leucine-rich repeat 827..850 CDD:275380
PCC 835..>907 CDD:188093
EGF_CA 920..955 CDD:238011
EGF_CA 958..996 CDD:238011
EGF_CA 998..1034 CDD:238011
EGF_CA 1078..1112 CDD:238011
LamG 1179..1312 CDD:214598
Blue background indicates that the domain is not in the aligned region.

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