DRSC/TRiP Functional Genomics Resources

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Protein Alignment kek4 and lrrc4ca

DIOPT Version :10

Sequence 1:NP_609615.2 Gene:kek4 / 34718 FlyBaseID:FBgn0032484 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_001018583.1 Gene:lrrc4ca / 553785 ZFINID:ZDB-GENE-050522-533 Length:647 Species:Danio rerio


Alignment Length:582 Identity:131/582 - (22%)
Similarity:217/582 - (37%) Gaps:154/582 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 DPCSISLKHLSLFLFKIYCLALIFRSASADWLLDCGNCHCKWNSGKKTADCRNLSLSGVPEYLSP 72
            ||..:    |||.| ::..:|.:.|:.:...:..|.|...|       ..|....|..||:.:|.
Zfish    25 DPLFV----LSLAL-QLLVVAGLVRAQTCPSVCSCSNQFSK-------VICTRRGLRDVPDGIST 77

  Fly    73 ------------------------EVQVLDLSHNHIFYLEENAF---------------LTT--- 95
                                    .:::|.||.|||..:|..||               |||   
Zfish    78 NTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRNIEIGAFNGLANLNTLELFDNRLTTIPN 142

  Fly    96 ----HLQNLQKLLIRNGTLKYLNQRSFTQLQILIELD-----------------LSNNLLVDL-- 137
                :|..|::|.:||..::.:...:|.::..|..||                 |||...::|  
Zfish   143 GAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLGM 207

  Fly   138 -----LPNVFDCLSKVRAIFLNGNLLQALRHGVFRNLKYLHKIELKRNRLVSIDAKAFVGVPLLS 197
                 :||:.. |.::..:.::||.|..:|.|.|:.|.:|.|:.:...::.:|:..||..:..|.
Zfish   208 CNLKEIPNLIP-LVRLDELEMSGNQLSIIRPGSFKGLVHLQKLWMMHAQIQTIERNAFDDLQSLV 271

  Fly   198 QIYLDNNELTKLRVESFQDLTKLTALSLVENPWNCTCDLQMFRDFVIGMNLYTPPTS-----CHY 257
            ::.|.:|.||.|..:.|..|..|..:.|..|||||.||:.....::..|   .|..:     |..
Zfish   272 ELNLAHNNLTLLPHDLFTPLHHLERVHLHHNPWNCNCDILWLSWWLKEM---VPANTSCCARCSS 333

  Fly   258 PLQLRGRLWIEDQPEAFAC-KPKIVYPTLSTSINTSKENVTLICRVHGSPNTVIAWDYTNQVYES 321
            |...:||...|.....|.| .|.||.|....:: |......|.||.:..  |.::|...|     
Zfish   334 PTSHKGRYIGELDQNYFHCYAPVIVEPPADLNV-TEGMAAELKCRANSL--TSVSWITPN----- 390

  Fly   322 RSKPVKSLQKQRIYIELLREDESKIRKFGHDVFVSRLTIVNARKSDEGVYTCLAENPGGKDSVHI 386
              ..:.:....:|.|.:|.:              ..|...|....|.|.|||:..|..|..:...
Zfish   391 --GSIMTHGAYKIRISVLND--------------GTLNFTNVTMQDTGTYTCMVSNSAGNTTASA 439

  Fly   387 SVVVQKDMERISLIDSNFFAIVCLIAMGFLSMSILFSLVTCLIFKRFKQFHPGQ-HTYLQPTSLP 450
            ::       .:|..:::.|:              .|:.||.    ...:..|.: |..:|..:.|
Zfish   440 TL-------NVSSTENSSFS--------------YFTTVTV----ETTEAPPDEGHPTVQQKNGP 479

  Fly   451 VQSPGSEEATAISALSSGVIRESKIVLDPLSAINEPSNKNYTLFKTSNSNGS-----EYMHT 507
            ..|.|..|....|..::.....:     |||  .:.::|.||:..|:.|:||     |.|.|
Zfish   480 TPSSGIWETLPPSFTTTTTTART-----PLS--TKATDKTYTIPVTAQSDGSLNTLDEVMKT 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek4NP_609615.2 LRR 59..>228 CDD:443914 54/238 (23%)
leucine-rich repeat 75..99 CDD:275380 13/45 (29%)
LRR_8 98..158 CDD:404697 17/83 (20%)
leucine-rich repeat 100..123 CDD:275380 5/22 (23%)
leucine-rich repeat 124..147 CDD:275380 10/46 (22%)
leucine-rich repeat 148..171 CDD:275380 7/22 (32%)
leucine-rich repeat 172..195 CDD:275380 5/22 (23%)
leucine-rich repeat 196..219 CDD:275380 8/22 (36%)
LRRCT 228..277 CDD:214507 16/54 (30%)
IG_like 294..390 CDD:214653 18/95 (19%)
Ig strand B 296..300 CDD:409353 1/3 (33%)
Ig strand C 309..323 CDD:409353 2/13 (15%)
Ig strand E 356..360 CDD:409353 1/3 (33%)
Ig strand F 370..375 CDD:409353 3/4 (75%)
Ig strand G 383..386 CDD:409353 0/2 (0%)
lrrc4caNP_001018583.1 LRRNT 48..81 CDD:214470 8/39 (21%)
LRR <77..326 CDD:443914 59/252 (23%)
leucine-rich repeat 79..102 CDD:275380 0/22 (0%)
leucine-rich repeat 103..126 CDD:275380 9/22 (41%)
leucine-rich repeat 127..150 CDD:275380 4/22 (18%)
leucine-rich repeat 151..174 CDD:275380 5/22 (23%)
leucine-rich repeat 175..199 CDD:275380 4/23 (17%)
leucine-rich repeat 200..221 CDD:275380 4/21 (19%)
leucine-rich repeat 222..245 CDD:275380 7/22 (32%)
leucine-rich repeat 246..269 CDD:275380 5/22 (23%)
leucine-rich repeat 270..291 CDD:275380 7/20 (35%)
IG_like 361..443 CDD:214653 19/112 (17%)
Ig strand B 372..376 CDD:409353 1/3 (33%)
Ig strand C 383..387 CDD:409353 0/3 (0%)
Ig strand E 409..413 CDD:409353 1/3 (33%)
Ig strand F 423..428 CDD:409353 3/4 (75%)
Ig strand G 436..439 CDD:409353 0/2 (0%)

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