DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kek4 and lrit2

DIOPT Version :9

Sequence 1:NP_001260435.1 Gene:kek4 / 34718 FlyBaseID:FBgn0032484 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_001018372.2 Gene:lrit2 / 553557 ZFINID:ZDB-GENE-050522-160 Length:561 Species:Danio rerio


Alignment Length:638 Identity:145/638 - (22%)
Similarity:239/638 - (37%) Gaps:150/638 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LFLFKIYCLALIFRSASADWLLDC-GNCHCKWNSGKKTADCRNLSLSGVPEYLSPEVQVLDLSHN 82
            ||...::|:.:...|:      :| ..|.|..:...::..|...:|:|:|:.|..::..:.:..:
Zfish     6 LFHLIVFCILISHISS------ECFPGCSCGTDRHGRSLTCMETALTGIPDGLPEDLTKIRIEKS 64

  Fly    83 HIFYLEENAFLTTHLQNLQKLLIRNGTLKYLNQRSFTQLQILIELDLSNNLLVDLLPNVFDCLSK 147
            .:..|.|..|  :|::.|:.|.:....:..:|.:|...|..|.||.|..|.|..:....|:....
Zfish    65 QLSELPEAVF--SHVKALKHLWLNFNDIAIINIKSLEGLANLTELRLQGNKLRSVPWTAFEETPN 127

  Fly   148 VRAIFLNGNLLQALRHGVFRNLKYLHKIELKRNRLVSIDAKAFVGVPLLSQIYLDNNELTKLRVE 212
            ::.:.|..|.:.||.....:.|..|..::|..|:|..|....|:..||    |...|:..|....
Zfish   128 LKILDLKHNRIDALPEHALKFLPGLTYLDLSSNQLSVISKDVFLNWPL----YHSENKHEKPSAS 188

  Fly   213 SFQDLTKLTALSLVENPWNCTCDLQMFRDFVIGMNLYTPP-------TSCHYPLQLRGRLWIEDQ 270
            :       ..|:|.:|||.|.|.|..|.:|:..:   |||       .:|..|....||.:.|  
Zfish   189 N-------VVLALHDNPWLCDCRLGGFIEFIKSL---TPPFILMNSYLTCSSPELKAGRFFHE-- 241

  Fly   271 PEAFAC-KPKIVYPTLSTSINTSKENVTLICRVHGSPNTVIAWDYTNQVYESRSKPVKSLQKQRI 334
            .:...| ||.:..|.::.:.... .||||.|.....|..||.|.|.                   
Zfish   242 VDLKTCVKPVVSAPVITITAPLG-GNVTLTCSASARPEAVIRWIYA------------------- 286

  Fly   335 YIELLREDESKIRKFGHDVFVSRLTIVNARKSDEGVYTCLAENPGGKDSVHISVVVQKDMERIS- 398
             :::||.....:.....|...|:|.|.:...:|.|:|||:|.|..|..||.|||.| |..|..| 
Zfish   287 -LKMLRGFRDILSHVDEDTISSQLVIPSLHSADRGLYTCIANNFLGNSSVIISVDV-KSPEGSSS 349

  Fly   399 --------LIDSNFFAIVCLIAMGFLSMSILFSLVT--------CLIFKRF-----KQFH--PGQ 440
                    :.:.|.:..:.:.......::|.:..||        .:.|.|:     :|.:  ||.
Zfish   350 HPSGPSAAIGEENVYIDIRIAKQTVYGITIEWRAVTENPAETWFTIHFGRYDAVKKEQIYIGPGI 414

  Fly   441 HTYLQPTSLPV-----------QSP----------GSE--EATAISALSSGVIRESKIVLDPLSA 482
            :||.....||.           |:|          ||:  |......|...|:    |||..:.|
Zfish   415 NTYSVTDLLPATKYEICVTLKNQAPRIGQCIVFVTGSDFNEMEQREKLIHIVV----IVLAMVLA 475

  Fly   483 INEPSNKNYTLFKTSNSNGSEYMHTRNYKDVRLNSNTYTENLDNQAESISSRNRELYSNIAGDRE 547
            :  |:..              |..|   .|.:.|.      .:..||...:|.....||..|||:
Zfish   476 V--PAGM--------------YACT---TDAKFNC------FERCAELWRNRRHAELSNPTGDRQ 515

  Fly   548 ----------KEELKQKDELDKDSRQSSLQSTGCSRKKGQIDELQPDLLPSTQ 590
                      .|.|.::...||.:|:.|.:         :|.:.:.|..|:.:
Zfish   516 GTFDSLQAASDEGLYKESNKDKKARRRSAE---------KIHKTKNDRRPTAE 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek4NP_001260435.1 leucine-rich repeat 75..99 CDD:275380 4/23 (17%)
LRR_8 99..158 CDD:290566 14/58 (24%)
leucine-rich repeat 100..123 CDD:275380 5/22 (23%)
leucine-rich repeat 124..147 CDD:275380 7/22 (32%)
LRR_8 146..206 CDD:290566 15/59 (25%)
leucine-rich repeat 148..171 CDD:275380 5/22 (23%)
leucine-rich repeat 172..195 CDD:275380 6/22 (27%)
leucine-rich repeat 196..219 CDD:275380 3/22 (14%)
TPKR_C2 228..277 CDD:301599 17/56 (30%)
IG_like 294..390 CDD:214653 29/95 (31%)
Ig 296..387 CDD:143165 25/90 (28%)
lrit2NP_001018372.2 LRR 1 55..76 3/22 (14%)
LRR_8 56..114 CDD:290566 14/59 (24%)
leucine-rich repeat 56..79 CDD:275378 4/24 (17%)
LRR_4 78..118 CDD:289563 11/39 (28%)
LRR 2 79..102 4/22 (18%)
leucine-rich repeat 80..103 CDD:275378 5/22 (23%)
LRR_8 103..162 CDD:290566 15/58 (26%)
LRR_4 103..143 CDD:289563 11/39 (28%)
LRR 3 103..124 7/20 (35%)
leucine-rich repeat 104..127 CDD:275378 7/22 (32%)
LRR_4 126..166 CDD:289563 9/39 (23%)
LRR 4 127..150 4/22 (18%)
leucine-rich repeat 128..151 CDD:275378 5/22 (23%)
LRR 5 151..172 6/20 (30%)
leucine-rich repeat 152..165 CDD:275378 4/12 (33%)
leucine-rich repeat 189..201 CDD:275378 5/18 (28%)
TPKR_C2 197..240 CDD:301599 15/45 (33%)
IG_like 258..341 CDD:214653 29/103 (28%)
IGc2 264..328 CDD:197706 22/84 (26%)
fn3 366..438 CDD:278470 12/71 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 507..561 14/62 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BAUD
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 91 1.000 Inparanoid score I5089
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.860

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