DRSC/TRiP Functional Genomics Resources

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Protein Alignment kek4 and lrit1b

DIOPT Version :10

Sequence 1:NP_609615.2 Gene:kek4 / 34718 FlyBaseID:FBgn0032484 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_001036218.1 Gene:lrit1b / 553432 ZFINID:ZDB-GENE-060616-45 Length:654 Species:Danio rerio


Alignment Length:623 Identity:133/623 - (21%)
Similarity:228/623 - (36%) Gaps:138/623 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 CGNC--HC-----KWNSGKKTAD--CRNLSLSGVPEYLSPEVQVLDLSHNHIFYLEENAFLTTHL 97
            ||:|  .|     |.:.|.|:..  |.:..|:.:|:...     ||.|                 
Zfish    20 CGSCPAQCSCFYHKLSDGSKSRSVLCNDPDLTDIPDNFP-----LDAS----------------- 62

  Fly    98 QNLQKLLIRNGTLKYLNQRSFTQLQILIELDLSNNLLVDLLPNVFDCLSKVRAIFLNGNLLQALR 162
                ||.|...:|..::...|.||..|..|.:|.|.|..:.|:.|..|..:..:.::||:|.:..
Zfish    63 ----KLRIEKTSLSRISSAPFQQLSSLEYLWISFNSLSSISPDTFRGLYALDELRMDGNVLTSFP 123

  Fly   163 HGVFRNLKYLHKIELKRNRLVSIDAKAFVGVPLLSQIYLDNNELTKLRVES----FQDLTKLTA- 222
            .....::..|..::|..|::.||.|:|.:.:..|:.:.|.:|.||.:..|.    |.....|.| 
Zfish   124 WECLLDMPSLRLLDLHNNKISSIPAEATLYIRNLTYLDLSSNSLTTVPPEVLMSWFSPKPPLDAE 188

  Fly   223 -----LSLVENPWNCTC---DLQMFRDFVIGMNLYTPPTS---------CHYPLQLRGRLWIEDQ 270
                 |.|.:|||.|.|   ||..|:.|        |.:|         |..|..|.|.|:  ..
Zfish   189 GSRMILGLHDNPWQCDCRLFDLVQFQKF--------PSSSVAFIDTGLRCAEPESLSGVLF--SD 243

  Fly   271 PEAFACKPKIVYPTLSTSINTSKENVTLICRVHGSPNTVIAWDYTNQVYESRSKPVKSLQKQRIY 335
            .|...|:...|:..::...::...||.|.|...|.|...::|      ..:..||:....:|.:.
Zfish   244 AELRRCQIPRVHTAVARVRSSIGNNVLLRCGTIGVPIPELSW------ARADGKPMNGTVQQEVS 302

  Fly   336 IELLREDESKIRKFGHDVFVSRLTIVNARKSDEGVYTCLAEN-PGGKDSVHISVVVQKDMERISL 399
            .|              .:..|.|::......|.|.|.|.|.| .|..|::            |||
Zfish   303 KE--------------GIIWSILSVPAVSYRDSGKYVCKATNFVGSADAI------------ISL 341

  Fly   400 IDSNFFAIVCLIAM--------GFLSMSILFSLVTCLIFKRFKQFHPGQHTYLQPTSLPVQSP-G 455
            :.|:.:.|...:|.        ||...:....|:.        ::.|...:...|...|:.|| |
Zfish   342 VISDTWQIDEAVAKRSHGKKSGGFGRAAYQEKLIA--------RYVPPSTSAAVPIIEPLNSPQG 398

  Fly   456 SE----EATAISALSSGVIRESKIVLDPLS-----AINEPSNKNYTLFKTSNSNGSEYMHTRNYK 511
            |.    |:.::||.:|.:..:.|....|:.     |:......|.....:|...|.|....|:.|
Zfish   399 SSSVQIESYSVSADASKLKPKPKPTAPPVGQTEPVALQRDVLNNLEPNASSLQQGPERRVVRSVK 463

  Fly   512 DVRLNSNTYTENLDNQAESISSRNRELYSNIAGDREKEELK---QKDELDKDSRQSSLQSTGCSR 573
            .:....:|.:.|......:.::....||: :.|:|:...:.   .|:.:..:......:...|..
Zfish   464 VIGDTDHTVSLNWRAPTATNTTSFSVLYA-VFGERDMRRINVGPGKNRITIEGLVPKTKYIACVC 527

  Fly   574 KKGQIDELQPDLLPSTQPTALKNINETFGPSAKKAEVN 611
            .||        |:|..:...:.:.:|....|..:..:|
Zfish   528 VKG--------LIPKKEQCVIFSTDEAASASGTQKLIN 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek4NP_609615.2 LRR 59..>228 CDD:443914 41/178 (23%)
leucine-rich repeat 75..99 CDD:275380 3/23 (13%)
LRR_8 98..158 CDD:404697 17/59 (29%)
leucine-rich repeat 100..123 CDD:275380 7/22 (32%)
leucine-rich repeat 124..147 CDD:275380 8/22 (36%)
leucine-rich repeat 148..171 CDD:275380 3/22 (14%)
leucine-rich repeat 172..195 CDD:275380 7/22 (32%)
leucine-rich repeat 196..219 CDD:275380 7/26 (27%)
LRRCT 228..277 CDD:214507 17/60 (28%)
IG_like 294..390 CDD:214653 21/96 (22%)
Ig strand B 296..300 CDD:409353 2/3 (67%)
Ig strand C 309..323 CDD:409353 1/13 (8%)
Ig strand E 356..360 CDD:409353 2/3 (67%)
Ig strand F 370..375 CDD:409353 2/4 (50%)
Ig strand G 383..386 CDD:409353 0/2 (0%)
lrit1bNP_001036218.1 LRR <50..>175 CDD:443914 36/150 (24%)
leucine-rich repeat 64..84 CDD:275378 6/19 (32%)
leucine-rich repeat 85..108 CDD:275378 8/22 (36%)
leucine-rich repeat 109..132 CDD:275378 3/22 (14%)
leucine-rich repeat 133..156 CDD:275378 7/22 (32%)
leucine-rich repeat 157..170 CDD:275378 5/12 (42%)
leucine-rich repeat 185..203 CDD:275378 7/17 (41%)
LRRCT 199..243 CDD:214507 16/53 (30%)
Ig 252..343 CDD:472250 25/122 (20%)
Ig strand B 269..273 CDD:409353 2/3 (67%)
Ig strand C 282..286 CDD:409353 1/9 (11%)
Ig strand E 309..313 CDD:409353 2/3 (67%)
Ig strand F 323..328 CDD:409353 2/4 (50%)
FN3 459..526 CDD:214495 9/67 (13%)

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