DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kek4 and lrfn1

DIOPT Version :10

Sequence 1:NP_609615.2 Gene:kek4 / 34718 FlyBaseID:FBgn0032484 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_956909.3 Gene:lrfn1 / 393587 ZFINID:ZDB-GENE-040426-1227 Length:742 Species:Danio rerio


Alignment Length:435 Identity:95/435 - (21%)
Similarity:157/435 - (36%) Gaps:131/435 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 IYCLALIFRSASADWLLDCGNCHCKWNSGKKTADCRNLSLSGVPEYLSPEVQVLDLSHNHIFYLE 88
            ::|: |:| .|.|...|..|.|.|:..|...|..|....|..||..:..:...|.|:.|      
Zfish     5 VFCV-LVF-GALAKAQLCPGRCICQTISPTLTLLCAKTGLLFVPPTVDRKTVELRLTDN------ 61

  Fly    89 ENAFLTTHLQNLQKLLIRNGTLKYLNQRSFTQLQILIELDLSNNLLVDLLPNVFDCLSKVRAIFL 153
               |:|.                 :.::.|..:..|:.|.||.|.:..:.|:.|..|..:||:.:
Zfish    62 ---FITA-----------------VRRKDFLNMTSLVHLTLSRNTISQIAPHAFMGLKSLRALHM 106

  Fly   154 NGNLLQA-----------LRHGVFRNLKYLHKIE---------------LKRNRLVSIDAKAFVG 192
            :||.|..           |||.:..| ..:|.||               |..|.|.::..:|...
Zfish   107 DGNRLSVINSDQLKGLMNLRHLILGN-NQIHHIEESSFDEFVATIEDLDLSYNNLRTLPWEAIAR 170

  Fly   193 VPLLSQIYLDNNELTKLRVESFQDLTKLTALSLVE------------------------------ 227
            :..::.:.||:|.:..:.|.:|..||||..|.:..                              
Zfish   171 MTNINTLTLDHNLIDHIGVGTFTLLTKLVRLDMTSNRLQTLPPDTLFQHAQVLSEPKTSSSSRLT 235

  Fly   228 -----NPWNCTCDLQMFRDFVIGMNLYTPPTSCHYPLQLRGRLWIEDQPEAFACKPKIVYPTLST 287
                 ||.:|.|:|...|......:|.|    |..|..|..:.:...|.|.|.|:|.::     |
Zfish   236 VSFGGNPLHCNCELLWLRRLTREDDLET----CASPEHLMDKYFWSIQEEEFICEPPLI-----T 291

  Fly   288 SINTSK------ENVTLICRVHGSPNTVIAWDYTNQVYESRSKPVKSLQKQRIYIELLREDESKI 346
            ....:|      :.|||.|:..|.|:..|.|.:.:      .|.|.:..:..:|      |...:
Zfish   292 KHQVTKPYVMEGQGVTLKCKAMGDPDPAIHWRFPD------GKLVHNNSRTLLY------DNGTL 344

  Fly   347 RKFGHDVFVSRLTIVNARKSDEGVYTCLAENPGG--KDSVHISVV 389
                 |:.::.|       .|.|.:.|:|.|..|  ..:||:.::
Zfish   345 -----DILITTL-------KDSGAFNCVASNAAGIATAAVHVHMI 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek4NP_609615.2 LRR 59..>228 CDD:443914 43/229 (19%)
leucine-rich repeat 75..99 CDD:275380 5/23 (22%)
LRR_8 98..158 CDD:404697 13/59 (22%)
leucine-rich repeat 100..123 CDD:275380 1/22 (5%)
leucine-rich repeat 124..147 CDD:275380 8/22 (36%)
leucine-rich repeat 148..171 CDD:275380 9/33 (27%)
leucine-rich repeat 172..195 CDD:275380 7/37 (19%)
leucine-rich repeat 196..219 CDD:275380 6/22 (27%)
LRRCT 228..277 CDD:214507 14/48 (29%)
IG_like 294..390 CDD:214653 22/98 (22%)
Ig strand B 296..300 CDD:409353 3/3 (100%)
Ig strand C 309..323 CDD:409353 2/13 (15%)
Ig strand E 356..360 CDD:409353 1/3 (33%)
Ig strand F 370..375 CDD:409353 1/4 (25%)
Ig strand G 383..386 CDD:409353 1/2 (50%)
lrfn1NP_956909.3 None

Return to query results.
Submit another query.