DRSC/TRiP Functional Genomics Resources

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Protein Alignment kek4 and Lrrc4c

DIOPT Version :10

Sequence 1:NP_609615.2 Gene:kek4 / 34718 FlyBaseID:FBgn0032484 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_001101223.1 Gene:Lrrc4c / 311236 RGDID:1311013 Length:640 Species:Rattus norvegicus


Alignment Length:672 Identity:146/672 - (21%)
Similarity:240/672 - (35%) Gaps:204/672 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 FDPCSISLKHLSLFLFKIYCLALIFRSASADWLLDCGNCHCKWNSGKKTADCRNLSLSGVPEYLS 71
            |||..:.|..|.|.:     :|.:.|:.:...:..|.|...|       ..|...:|..||:.:|
  Rat    23 FDPLLVVLLALQLLV-----VAGLVRAQTCPSVCSCSNQFSK-------VICVRKNLREVPDGIS 75

  Fly    72 P------------------------EVQVLDLSHNHIFYLEENAF---------------LTT-- 95
            .                        .:::|.||.|||..:|..||               |||  
  Rat    76 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIP 140

  Fly    96 -----HLQNLQKLLIRNGTLKYLNQRSFTQLQILIELD-----------------LSNNLLVDL- 137
                 :|..|::|.:||..::.:...:|.::..|..||                 |||...::| 
  Rat   141 NGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLA 205

  Fly   138 ------LPNVFDCLSKVRAIFLNGNLLQALRHGVFRNLKYLHKIELKRNRLVSIDAKAFVGVPLL 196
                  :||:.. |.|:..:.|:||.|.|:|.|.|:.|.:|.|:.:.::::..|:..||..:..|
  Rat   206 MCNLREIPNLTP-LIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSL 269

  Fly   197 SQIYLDNNELTKLRVESFQDLTKLTALSLVENPWNCTCDLQMFRDFVIGMNLYTPPTS-----CH 256
            .:|.|.:|.||.|..:.|..|..|..:.|..|||||.||:.....::..|   .|..:     |:
  Rat   270 VEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCDILWLSWWIRDM---APSNTACCARCN 331

  Fly   257 YPLQLRGRLWIEDQPEAFAC-KPKIVYPTLSTSINTSKENVTLICRVHGSPNTVIAWDYTNQVYE 320
            .|..|:||...|.....|.| .|.||.|....:: |......|.||...| .|.::|...|..  
  Rat   332 TPPNLKGRYIGELDQNYFTCYAPVIVEPPADLNV-TEGMAAELKCRASTS-LTSVSWITPNGT-- 392

  Fly   321 SRSKPVKSLQKQRIYIELLREDESKIRKFGHDVFVSRLTIVNARKSDEGVYTCLAENPGGKDSV- 384
                 |.:....::.|.:|.:              ..|...|....|.|:|||:..|..|..:. 
  Rat   393 -----VMTHGAYKVRIAVLSD--------------GTLNFTNVTVQDTGMYTCMVSNSVGNTTAS 438

  Fly   385 --------------HISVVVQKDME----RISLIDSNF--------------------------- 404
                          :.|.|..:.||    .....|:|.                           
  Rat   439 ATLNVTAATTTPFSYFSTVTVETMEPSQDEARTTDNNVGPTPVIDWETTNVTTSLTPQSTRSTEK 503

  Fly   405 -FAI-----------------VCLIAMG-FLSMSILFSLVTCLIFKRFKQFHPGQHTYLQPTSLP 450
             |.|                 ...|.:| |::::::.:::..:.:|..||.|...|.  .||...
  Rat   504 TFTIPVTDINSGIPGIDEVMKTTKIIIGCFVAITLMAAVMLVIFYKMRKQHHRQNHH--APTRTV 566

  Fly   451 VQSPGSEEATAISALSSGVIRESKIVLDPLSAINEPSNKNYTLFK-----TSNSNGSEYMHTRNY 510
            ......:|.|..:.:.|.:         |:.||......:|..:|     |:..|....:|:..:
  Rat   567 EIINVDDEITGDTPMESHL---------PMPAIEHEHLNHYNSYKSPFNHTTTVNTINSIHSSVH 622

  Fly   511 KD--VRLNSNTYTENLDNQAES 530
            :.  :|:||.      ||..|:
  Rat   623 EPLLIRMNSK------DNVQET 638

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek4NP_609615.2 LRR 59..>228 CDD:443914 58/238 (24%)
leucine-rich repeat 75..99 CDD:275380 13/45 (29%)
LRR_8 98..158 CDD:404697 19/83 (23%)
leucine-rich repeat 100..123 CDD:275380 5/22 (23%)
leucine-rich repeat 124..147 CDD:275380 10/46 (22%)
leucine-rich repeat 148..171 CDD:275380 9/22 (41%)
leucine-rich repeat 172..195 CDD:275380 5/22 (23%)
leucine-rich repeat 196..219 CDD:275380 9/22 (41%)
LRRCT 228..277 CDD:214507 17/54 (31%)
IG_like 294..390 CDD:214653 20/110 (18%)
Ig strand B 296..300 CDD:409353 1/3 (33%)
Ig strand C 309..323 CDD:409353 2/13 (15%)
Ig strand E 356..360 CDD:409353 1/3 (33%)
Ig strand F 370..375 CDD:409353 3/4 (75%)
Ig strand G 383..386 CDD:409353 0/17 (0%)
Lrrc4cNP_001101223.1 LRRNT 47..80 CDD:214470 8/39 (21%)
LRR <76..325 CDD:443914 63/252 (25%)
leucine-rich repeat 78..101 CDD:275380 0/22 (0%)
leucine-rich repeat 102..125 CDD:275380 9/22 (41%)
leucine-rich repeat 126..149 CDD:275380 4/22 (18%)
leucine-rich repeat 150..173 CDD:275380 5/22 (23%)
leucine-rich repeat 174..198 CDD:275380 4/23 (17%)
leucine-rich repeat 199..220 CDD:275380 4/21 (19%)
leucine-rich repeat 221..244 CDD:275380 9/22 (41%)
leucine-rich repeat 245..268 CDD:275380 5/22 (23%)
leucine-rich repeat 269..290 CDD:275380 8/20 (40%)
IG_like 360..443 CDD:214653 20/105 (19%)
Ig strand B 371..375 CDD:409390 1/3 (33%)
Ig strand C 383..387 CDD:409390 0/3 (0%)
Ig strand E 409..413 CDD:409390 1/3 (33%)
Ig strand F 423..428 CDD:409390 3/4 (75%)
Ig strand G 436..439 CDD:409390 0/2 (0%)

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