Sequence 1: | NP_001260435.1 | Gene: | kek4 / 34718 | FlyBaseID: | FBgn0032484 | Length: | 649 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001258010.1 | Gene: | Lrrc4b / 308571 | RGDID: | 1307121 | Length: | 709 | Species: | Rattus norvegicus |
Alignment Length: | 438 | Identity: | 106/438 - (24%) |
---|---|---|---|
Similarity: | 166/438 - (37%) | Gaps: | 122/438 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 45 CHCKWNSGKKTADCRNLSLSGVP-------EYLSPE-----------------VQVLDLSHNHIF 85
Fly 86 YLEENAF---------------LTT-------HLQNLQKLLIRNGTLKYLNQRSFTQLQILIELD 128
Fly 129 LSN------------NLLVDL------------LPNVFDCLSKVRAIFLNGNLLQALRHGVFRNL 169
Fly 170 KYLHKIELKRNRLVSIDAKAFVGVPLLSQIYLDNNELTKLRVESFQDLTKLTALSLVENPWNCTC 234
Fly 235 DLQMFRDFVIGMNLY---TPPTS------CHYPLQLRGRLWIEDQPEAFAC-KPKIVYPTLSTSI 289
Fly 290 N-TSKENVTLICRVHGSPNTVIAWDYTNQVYESRSKPVKSLQKQRIYIELLREDESKIRKFGHDV 353
Fly 354 FVSRLTIVNARKSDEGVYTCLAENPGGKDSVHISVVVQKDMERISLID 401 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
kek4 | NP_001260435.1 | leucine-rich repeat | 75..99 | CDD:275380 | 11/45 (24%) |
LRR_8 | 99..158 | CDD:290566 | 18/82 (22%) | ||
leucine-rich repeat | 100..123 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 124..147 | CDD:275380 | 10/46 (22%) | ||
LRR_8 | 146..206 | CDD:290566 | 17/59 (29%) | ||
leucine-rich repeat | 148..171 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 172..195 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 196..219 | CDD:275380 | 7/22 (32%) | ||
TPKR_C2 | 228..277 | CDD:301599 | 18/58 (31%) | ||
IG_like | 294..390 | CDD:214653 | 21/95 (22%) | ||
Ig | 296..387 | CDD:143165 | 21/90 (23%) | ||
Lrrc4b | NP_001258010.1 | LRRNT | 59..92 | CDD:214470 | 7/30 (23%) |
LRR | <89..299 | CDD:227223 | 47/210 (22%) | ||
LRR 1 | 89..110 | 2/20 (10%) | |||
leucine-rich repeat | 90..113 | CDD:275380 | 2/22 (9%) | ||
LRR 2 | 113..134 | 7/20 (35%) | |||
leucine-rich repeat | 114..137 | CDD:275380 | 7/22 (32%) | ||
LRR 3 | 137..158 | 3/20 (15%) | |||
leucine-rich repeat | 138..161 | CDD:275380 | 4/22 (18%) | ||
LRR 4 | 161..182 | 5/20 (25%) | |||
leucine-rich repeat | 162..185 | CDD:275380 | 5/22 (23%) | ||
LRR 5 | 185..207 | 4/21 (19%) | |||
leucine-rich repeat | 186..210 | CDD:275380 | 5/23 (22%) | ||
LRR 6 | 210..231 | 3/21 (14%) | |||
leucine-rich repeat | 211..232 | CDD:275380 | 4/21 (19%) | ||
LRR 7 | 232..253 | 7/20 (35%) | |||
leucine-rich repeat | 233..256 | CDD:275380 | 8/22 (36%) | ||
LRR 8 | 256..277 | 6/20 (30%) | |||
leucine-rich repeat | 257..280 | CDD:275380 | 6/22 (27%) | ||
LRR 9 | 280..301 | 6/20 (30%) | |||
leucine-rich repeat | 281..302 | CDD:275380 | 6/20 (30%) | ||
LRRCT | 313..363 | CDD:214507 | 17/56 (30%) | ||
I-set | 366..455 | CDD:400151 | 28/119 (24%) | ||
Ig strand A | 366..369 | CDD:409353 | 1/2 (50%) | ||
Ig strand A' | 373..376 | CDD:409353 | 1/2 (50%) | ||
Ig strand B | 382..389 | CDD:409353 | 2/6 (33%) | ||
Ig strand C | 395..400 | CDD:409353 | 1/4 (25%) | ||
Ig strand C' | 403..405 | CDD:409353 | 0/1 (0%) | ||
Ig strand D | 414..418 | CDD:409353 | 1/3 (33%) | ||
Ig strand E | 421..425 | CDD:409353 | 1/3 (33%) | ||
Ig strand F | 435..442 | CDD:409353 | 3/6 (50%) | ||
Ig strand G | 445..455 | CDD:409353 | 1/16 (6%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 496..552 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | otm46071 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |