DRSC/TRiP Functional Genomics Resources

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Protein Alignment kek4 and Lrfn3

DIOPT Version :9

Sequence 1:NP_001260435.1 Gene:kek4 / 34718 FlyBaseID:FBgn0032484 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_001100972.1 Gene:Lrfn3 / 308495 RGDID:1305567 Length:626 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek4NP_001260435.1 leucine-rich repeat 75..99 CDD:275380
LRR_8 99..158 CDD:290566
leucine-rich repeat 100..123 CDD:275380
leucine-rich repeat 124..147 CDD:275380
LRR_8 146..206 CDD:290566
leucine-rich repeat 148..171 CDD:275380
leucine-rich repeat 172..195 CDD:275380
leucine-rich repeat 196..219 CDD:275380
TPKR_C2 228..277 CDD:301599
IG_like 294..390 CDD:214653
Ig 296..387 CDD:143165
Lrfn3NP_001100972.1 LRR <63..>222 CDD:227223
leucine-rich repeat 63..84 CDD:275380
LRR 1 84..105
leucine-rich repeat 85..108 CDD:275380
LRR 2 108..129
leucine-rich repeat 109..132 CDD:275380
LRR 3 132..153
leucine-rich repeat 133..157 CDD:275380
LRR 4 157..178
leucine-rich repeat 158..181 CDD:275380
LRR 5 181..202
leucine-rich repeat 182..205 CDD:275380
LRR 6 205..226
leucine-rich repeat 206..230 CDD:275380
leucine-rich repeat 242..253 CDD:275378
TPKR_C2 249..>281 CDD:417692
Ig 296..383 CDD:416386
Ig strand A 296..299 CDD:409353
Ig strand A' 303..306 CDD:409353
Ig strand B 312..320 CDD:409353
Ig strand C 326..331 CDD:409353
Ig strand C' 334..336 CDD:409353
Ig strand D 342..346 CDD:409353
Ig strand E 349..353 CDD:409353
Ig strand F 363..370 CDD:409353
Ig strand G 373..383 CDD:409353
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 382..423
fn3 425..502 CDD:394996
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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