DRSC/TRiP Functional Genomics Resources

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Protein Alignment kek4 and Slitrk1

DIOPT Version :10

Sequence 1:NP_609615.2 Gene:kek4 / 34718 FlyBaseID:FBgn0032484 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_001100753.1 Gene:Slitrk1 / 306147 RGDID:1308858 Length:696 Species:Rattus norvegicus


Alignment Length:312 Identity:73/312 - (23%)
Similarity:116/312 - (37%) Gaps:83/312 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 CHCKWNSGKKTADCRNLSLSGVPEYLSPEVQV--LDLSHNHIFYLEENAF------LTTHLQN-- 99
            |.|....|....||.....:.:..:.:|..|.  |.|..|.:..|..|.|      ::.|::|  
  Rat    29 CSCNEIEGDLHVDCEKKGFTSLQRFTAPTSQFYHLFLHGNSLTRLFPNEFANFYNAVSLHMENNG 93

  Fly   100 --------------LQKLLIRNGTLKYLNQRSFTQLQILIELDLSNNLLVDLLPNVFDCLSKVRA 150
                          :::|.|.|..:|...:::|..|..|..|....|||.|:.|..|..|:|:..
  Rat    94 LHEIVPGAFLGLQLVKRLHINNNKIKSFRKQTFLGLDDLEYLQADFNLLRDIDPGAFQDLNKLEV 158

  Fly   151 IFLNGNLLQALRHGVFRNLKYLHKIELKRNRLVSIDAKAFVGVPLLSQIYLDNNELTKLRVESFQ 215
            :.||.||:..|...||:.:...| ::|:.|||.::..:                       |..:
  Rat   159 LILNDNLISTLPANVFQYVPITH-LDLRGNRLKTLPYE-----------------------EVLE 199

  Fly   216 DLTKLTALSLVENPWNCTCDLQMFRDFV--IGMNLYTPPTSCHYPLQLRGRLWIED--------- 269
            .:..:..:.|.:|||:|||||...::::  |..|.......|..|.:|:|:...|.         
  Rat   200 QIPGIAEILLEDNPWDCTCDLLSLKEWLENIPKNALIGRVVCEAPTRLQGKDLNETTEQDLCPLK 264

  Fly   270 ------------QPEAFACKPKIVYPTLSTSINTSKENVTLICRVHGSPNTV 309
                        |.|.||..|   .|| ...||...|        |.:|..|
  Rat   265 NRVDSSLPAPPAQEETFAPGP---LPT-PFKINGQDE--------HATPGAV 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek4NP_609615.2 LRR 59..>228 CDD:443914 40/192 (21%)
leucine-rich repeat 75..99 CDD:275380 8/31 (26%)
LRR_8 98..158 CDD:404697 20/75 (27%)
leucine-rich repeat 100..123 CDD:275380 6/22 (27%)
leucine-rich repeat 124..147 CDD:275380 9/22 (41%)
leucine-rich repeat 148..171 CDD:275380 7/22 (32%)
leucine-rich repeat 172..195 CDD:275380 5/22 (23%)
leucine-rich repeat 196..219 CDD:275380 1/22 (5%)
LRRCT 228..277 CDD:214507 19/71 (27%)
IG_like 294..390 CDD:214653 4/16 (25%)
Ig strand B 296..300 CDD:409353 0/3 (0%)
Ig strand C 309..323 CDD:409353 1/1 (100%)
Ig strand E 356..360 CDD:409353
Ig strand F 370..375 CDD:409353
Ig strand G 383..386 CDD:409353
Slitrk1NP_001100753.1 leucine-rich repeat 39..60 CDD:275380 3/20 (15%)
leucine-rich repeat 62..83 CDD:275380 6/20 (30%)
LRR <63..>212 CDD:443914 38/172 (22%)
leucine-rich repeat 84..107 CDD:275380 2/22 (9%)
leucine-rich repeat 108..131 CDD:275380 6/22 (27%)
leucine-rich repeat 132..155 CDD:275380 9/22 (41%)
leucine-rich repeat 156..177 CDD:275380 7/20 (35%)
LRRCT 212..>250 CDD:214507 13/37 (35%)
leucine-rich repeat 356..372 CDD:275380
LRR <358..>530 CDD:443914
leucine-rich repeat 377..400 CDD:275380
leucine-rich repeat 401..424 CDD:275380
leucine-rich repeat 425..448 CDD:275380
leucine-rich repeat 449..472 CDD:275380
leucine-rich repeat 473..495 CDD:275380
leucine-rich repeat 496..520 CDD:275380
LRRCT 529..579 CDD:214507
Blue background indicates that the domain is not in the aligned region.

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