DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kek4 and Flrt2

DIOPT Version :9

Sequence 1:NP_001260435.1 Gene:kek4 / 34718 FlyBaseID:FBgn0032484 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_001100220.1 Gene:Flrt2 / 299236 RGDID:1308574 Length:660 Species:Rattus norvegicus


Alignment Length:670 Identity:129/670 - (19%)
Similarity:222/670 - (33%) Gaps:206/670 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 FLFKIYCLALIFRSASADWLLDCGN-CHCKWNSGKKTADCRNLSLSGVPEYLSPEVQVLDLSHNH 83
            |:.|.:.:..:...:....||.|.: |.|..|    ...|...||:.||..:...|.||.|.:|.
  Rat    14 FVLKFWLIMSLGLYSHVSKLLACPSVCRCDRN----FVYCNERSLTSVPLGIPEGVTVLYLHNNQ 74

  Fly    84 IFYLEENAFLTTHLQNLQK------------------------LLIRNGTLKYLNQRSFTQLQIL 124
            |    .||.....|.|:|.                        |.::...::.:::.:..||..|
  Rat    75 I----NNAGFPAELHNVQSVHTVYLYGNQLDEFPMNLPKNVRVLHLQENNIQTISRAALAQLLKL 135

  Fly   125 IELDLSNN----------------------------------LLVDL-------------LPNVF 142
            .||.|.:|                                  |.|||             ....|
  Rat   136 EELHLDDNSISTVGVEDGAFREAISLKLLFLSKNHLSSVPVGLPVDLQELRVDENRIAVISDMAF 200

  Fly   143 DCLSKVRAIFLNGNLL--QALRHGVFRNL----------------------KYLHKIELKRNRLV 183
            ..|:.:..:.::||||  :.:..|.|.:|                      .:|.::.|:.|::.
  Rat   201 QNLTSLERLIVDGNLLTNKGIADGTFSHLTKLKEFSIVRNSLSHPPPDLPGTHLIRLYLQDNQIN 265

  Fly   184 SIDAKAFVGVPLLSQIYLDNNELTKLRVESFQDLTKLTALSLVENPWNCTCDLQMFRDFV--IGM 246
            .|...||..:..|.::.:.||:|..|....|..|:.|..|:...|||.|.|.::...:::  |..
  Rat   266 HIPLTAFANLRKLERLDISNNQLRMLTQGVFDHLSNLKQLTARNNPWFCDCSIKWVTEWLKYIPS 330

  Fly   247 NLYTPPTSCHYPLQLRGRLWIEDQPEAFAC------------KPKIVYPTLSTSINTSKENVTLI 299
            :|......|..|.|:||....|......:|            .|..|.||      |....|::.
  Rat   331 SLNVRGFMCQGPEQVRGMAVRELNMNLLSCPTTTPGLPVFTPAPSTVSPT------TQSPTVSVP 389

  Fly   300 CRVHGS------PN---TVIAWDYTNQVYESRSKPVKSLQKQRIYIELLREDESKIR-------- 347
            ....||      |:   |:..||..    |..:.|:    .:||.:.:...:::.|:        
  Rat   390 SPSRGSVPPAPAPSKLPTIPDWDGR----ERATPPI----SERIQLSIHFVNDTSIQVSWLSLFT 446

  Fly   348 ---------KFGHDVF--VSRLTIVNARKSDEGVYTCLAENPGGKDSVHISVVVQKDMERISLID 401
                     |.||.:.  :.:..||:..|.                  |:|:|   ::|..|...
  Rat   447 VMAYKLTWVKMGHSLVGGIVQERIVSGEKQ------------------HLSLV---NLEPRSTYR 490

  Fly   402 SNFFAIVCLIAMGFLSMSILFSLVTCLIFKRFKQFHPGQHT---YLQPTSLPVQSPGSEEATAIS 463
                  :||:.:...:...:...:...........:.|.:|   :.|.||..:.||     ..::
  Rat   491 ------ICLVPLDAFNYRTVEDTICSEATTHASYLNNGSNTASSHEQTTSHTMGSP-----FLLA 544

  Fly   464 ALSSGVIRESKIVLDPLSAINEPSNKNYTLFKTSNSNG---SEYMHTRNYKDVRLNSNTYTENLD 525
            .|..|.:....:||..:...:......||..|...:.|   .:|......||     |:..|..:
  Rat   545 GLIGGAVIFVLVVLLSVFCWHMHKKGRYTSQKWKYNRGRRKDDYCEAGTKKD-----NSILEMTE 604

  Fly   526 NQAESISSRNRELYSNIAGD 545
            ...:.:|..|.:|   :.||
  Rat   605 TSFQIVSLNNDQL---LKGD 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek4NP_001260435.1 leucine-rich repeat 75..99 CDD:275380 8/23 (35%)
LRR_8 99..158 CDD:290566 18/129 (14%)
leucine-rich repeat 100..123 CDD:275380 4/46 (9%)
leucine-rich repeat 124..147 CDD:275380 11/69 (16%)
LRR_8 146..206 CDD:290566 16/83 (19%)
leucine-rich repeat 148..171 CDD:275380 7/46 (15%)
leucine-rich repeat 172..195 CDD:275380 6/22 (27%)
leucine-rich repeat 196..219 CDD:275380 7/22 (32%)
TPKR_C2 228..277 CDD:301599 14/62 (23%)
IG_like 294..390 CDD:214653 20/123 (16%)
Ig 296..387 CDD:143165 19/118 (16%)
Flrt2NP_001100220.1 LRRNT 35..66 CDD:214470 9/34 (26%)
LRR 1. /evidence=ECO:0000255 62..87 9/28 (32%)
leucine-rich repeat 65..86 CDD:275378 9/24 (38%)
LRR 2. /evidence=ECO:0000255 88..108 1/19 (5%)
PPP1R42 89..311 CDD:411060 36/221 (16%)
leucine-rich repeat 90..110 CDD:275380 0/19 (0%)
LRR 3. /evidence=ECO:0000255 109..131 1/21 (5%)
leucine-rich repeat 111..134 CDD:275380 3/22 (14%)
LRR 4. /evidence=ECO:0000255 132..157 6/24 (25%)
leucine-rich repeat 135..160 CDD:275380 5/24 (21%)
LRR 5. /evidence=ECO:0000255 159..181 1/21 (5%)
leucine-rich repeat 161..181 CDD:275380 1/19 (5%)
leucine-rich repeat 182..205 CDD:275380 3/22 (14%)
LRR 6. /evidence=ECO:0000255 183..202 1/18 (6%)
LRR 7. /evidence=ECO:0000255 203..228 7/24 (29%)
leucine-rich repeat 206..231 CDD:275380 7/24 (29%)
LRR 8. /evidence=ECO:0000255 229..251 1/21 (5%)
leucine-rich repeat 232..253 CDD:275380 0/20 (0%)
LRR 9. /evidence=ECO:0000255 252..274 6/21 (29%)
leucine-rich repeat 254..277 CDD:275380 6/22 (27%)
LRR 10. /evidence=ECO:0000255 275..298 6/22 (27%)
leucine-rich repeat 278..301 CDD:275380 7/22 (32%)
PCC 282..>359 CDD:188093 21/76 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 372..413 11/46 (24%)
fn3 426..494 CDD:394996 13/94 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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