DRSC/TRiP Functional Genomics Resources

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Protein Alignment kek4 and Lrit1

DIOPT Version :9

Sequence 1:NP_001260435.1 Gene:kek4 / 34718 FlyBaseID:FBgn0032484 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_647547.2 Gene:Lrit1 / 246214 RGDID:628607 Length:623 Species:Rattus norvegicus


Alignment Length:529 Identity:104/529 - (19%)
Similarity:175/529 - (33%) Gaps:142/529 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 WLLDCGNCHCKWN----------------SGKKTADCRNLSLSGVPEYLSPEVQVLDLSHNHIFY 86
            |||..|..|..|:                |..:|..|.:..|:..|..:.|:.            
  Rat     9 WLLALGGPHQAWSFCPSQCSCSLHILSDGSKARTVVCSDPDLTLPPASIPPDT------------ 61

  Fly    87 LEENAFLTTHLQNLQKLLIRNGTLKYLNQRSFTQLQILIELDLSNNLLVDLLPNVFDCLSKVRAI 151
                          .||.:....::.:...:|..|..|.:|.|..|.|.:|...:...|.::|.:
  Rat    62 --------------CKLRLERTAIRRVPGETFRPLSRLEQLWLPYNALSELSTLMLRGLRRLREL 112

  Fly   152 FLNGNLLQALRHGVFRNLKYLHKIELKRNRLVSIDAKAFVGVPLLSQIYLDNNELTKLRVESFQD 216
            .|.||.|........::...|..::|:.|||.::..:|...:..|:.:.|.||:|.:|..|....
  Rat   113 RLPGNHLVTFPWAALKDTPQLQLLDLQANRLSTLPPEAVHFLENLTFLDLSNNQLMRLPEELLDT 177

  Fly   217 LTKL------------TALSLVENPWNCTCDL----QMFRDFVIGMNLYTPPTSCHYPLQLRGRL 265
            ...|            ..|.|.:|||.|.|.|    .:...:...:........|..|..|.|..
  Rat   178 WAHLKTGPYLSSRRTRLVLGLQDNPWVCDCRLYDLVHLLDGWASNLIFIEARLRCGSPRSLAGVA 242

  Fly   266 WIEDQPEAFACKPKIVYPTLSTSINTSKENVTLICRVHGSPNTVIAWDYTNQVYESRSKPVKSLQ 330
            :  .|.|...|:...:.|.:::.|:.....|.|.|...|.|...::|...|      .:|:....
  Rat   243 F--SQLELRKCQSPELRPGVTSIISPLGSTVLLRCGATGIPGPEMSWRRAN------GRPLNGTV 299

  Fly   331 KQRIYIELLREDESKIRKFGHDVFVSRLTIVNARKSDEGVYTCLAENPGGKDSVHISVVVQKDME 395
            .|.:                              .||...:|.|                  |:.
  Rat   300 HQEV------------------------------SSDGSSWTLL------------------DLP 316

  Fly   396 RISLIDSNFFAIVCLIAMGFLSMS-ILFSLVTCLIFKRFKQFHPGQHTYLQPTSLP--VQSPGSE 457
            .:||.||..:  :|. |..||..| .|.||:..         .|  .|..:.|.:|  :.:...|
  Rat   317 VVSLFDSGDY--ICQ-AKNFLGASETLISLIVT---------EP--QTSTEYTGIPGALWARTGE 367

  Fly   458 EATAISALSSGVIRESKIVLDPLSAINEPS-----------NKNYTLFKTSNSNGSEYMHTRNYK 511
            .|.|.:..:..|.|....|.:|::...:||           |....:....:...||:..|:..:
  Rat   368 GAEAAAYNNKLVARHVPHVPEPVALATKPSVPSIKEELPLQNFQMDVPGEFSREPSEHQETQMVR 432

  Fly   512 DVRLNSNTY 520
            .:::..:||
  Rat   433 SLKVVGDTY 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek4NP_001260435.1 leucine-rich repeat 75..99 CDD:275380 0/23 (0%)
LRR_8 99..158 CDD:290566 15/58 (26%)
leucine-rich repeat 100..123 CDD:275380 4/22 (18%)
leucine-rich repeat 124..147 CDD:275380 7/22 (32%)
LRR_8 146..206 CDD:290566 15/59 (25%)
leucine-rich repeat 148..171 CDD:275380 5/22 (23%)
leucine-rich repeat 172..195 CDD:275380 6/22 (27%)
leucine-rich repeat 196..219 CDD:275380 7/22 (32%)
TPKR_C2 228..277 CDD:301599 12/52 (23%)
IG_like 294..390 CDD:214653 13/95 (14%)
Ig 296..387 CDD:143165 13/90 (14%)
Lrit1NP_647547.2 LRRNT 23..61 CDD:214470 6/37 (16%)
LRR 1 60..81 3/46 (7%)
LRR_8 63..143 CDD:290566 19/79 (24%)
leucine-rich repeat 64..84 CDD:275378 3/19 (16%)
LRR 2 84..105 6/20 (30%)
leucine-rich repeat 85..132 CDD:275378 12/46 (26%)
LRR 3 108..128 5/19 (26%)
LRR_8 131..>176 CDD:290566 13/44 (30%)
LRR_4 131..172 CDD:289563 12/40 (30%)
LRR 4 132..153 6/20 (30%)
leucine-rich repeat 133..156 CDD:275378 6/22 (27%)
LRR 5 156..177 7/20 (35%)
leucine-rich repeat 157..180 CDD:275378 7/22 (32%)
leucine-rich repeat 181..205 CDD:275378 6/23 (26%)
TPKR_C2 201..>240 CDD:301599 9/38 (24%)
Ig 257..345 CDD:299845 28/144 (19%)
IG_like 267..345 CDD:214653 26/134 (19%)
FN3 431..501 CDD:214495 2/11 (18%)
LRR 6 525..548
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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