DRSC/TRiP Functional Genomics Resources

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Protein Alignment kek4 and iglr-3

DIOPT Version :9

Sequence 1:NP_001260435.1 Gene:kek4 / 34718 FlyBaseID:FBgn0032484 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_001293349.1 Gene:iglr-3 / 171771 WormBaseID:WBGene00021353 Length:488 Species:Caenorhabditis elegans


Alignment Length:408 Identity:95/408 - (23%)
Similarity:157/408 - (38%) Gaps:73/408 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 LLDCGN----CHCKWNSGKKTADCRNLSLSGVPEYLSPEVQVLDLSHNHIFYLEENAFLTTHLQN 99
            ::.|.|    |...|.|.:.:.||.:|:|...|:.| |.|..|.||:|.||.:   ....:..:.
 Worm    13 IISCSNAPKTCKSFWISNRPSQDCASLTLQEPPQLL-PNVLSLSLSNNSIFRI---TTFPSEYRR 73

  Fly   100 LQKLLIRNGTLKYLNQRSFTQLQILIELDLSNNLLVDL-LPNVFDCLSKVRAIFLNGNLLQALRH 163
            ||.|.:....|:.|:..:.:..:.|.|||:|.|.|..| :|.....|..:...|.....:..:.|
 Worm    74 LQSLRLDQCQLEKLDFDALSVFEQLRELDVSRNSLSKLIIPRNLASLRVLNLAFNAFTYVPDMSH 138

  Fly   164 GVFRNLKYLHKIELKRNRLVSIDAKAFVGVPLLSQIYLDNNELTKLRVESFQDLT------KLTA 222
                 |:.|..::|..|||:|:..:.   :|.       |.|:.:|....||.|:      ||..
 Worm   139 -----LESLRLVDLSHNRLISVRPRM---LPF-------NLEVVRLAANRFQHLSPWPFLHKLQE 188

  Fly   223 LSLVENPWNCTCDLQMFRDFVIGMNLY-TPPTSCHYPLQLR-----GRLWIEDQPEAFACKPKIV 281
            |.:..|...|.|.|..|..:...:.|: :....|..|.:||     |:.         .|.|.:|
 Worm   189 LDVTFNDLECDCSLWHFVTWAEKLALFDSTMLPCRRPSELRKSPIDGKT---------VCGPTVV 244

  Fly   282 YPTLSTSINTSKENVTLICRVHGSPNTVIAWDYTNQVYESRSKPVKSLQKQRIYIELLREDESKI 346
            ..:..:::.:..:...:.|....:|:..:.|.:..:...|      .|.::.:       .||..
 Worm   245 TSSPESAVVSLDDAHVMCCTALATPSPQLYWQFNGKNISS------GLSQKHL-------SESGK 296

  Fly   347 RKFGHDVFVSRLTIVNARKSDEGVYTCLAENPGGKDSVHISVVVQKDMERISLIDSNFFAIVCLI 411
            .:|       .|.|...|..|.|.|.|:|...|...|....  |::|...|.|..:....|.|..
 Worm   297 LEF-------CLEIPKVRLKDMGKYKCVASLAGLNSSKEFH--VERDKIPIVLNSAEGIMIYCQF 352

  Fly   412 AMGFLSMSILFSLVTCLI 429
            .:      ..|..|.|:|
 Worm   353 TI------CTFIGVCCVI 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek4NP_001260435.1 leucine-rich repeat 75..99 CDD:275380 6/23 (26%)
LRR_8 99..158 CDD:290566 16/59 (27%)
leucine-rich repeat 100..123 CDD:275380 5/22 (23%)
leucine-rich repeat 124..147 CDD:275380 10/23 (43%)
LRR_8 146..206 CDD:290566 11/59 (19%)
leucine-rich repeat 148..171 CDD:275380 3/22 (14%)
leucine-rich repeat 172..195 CDD:275380 6/22 (27%)
leucine-rich repeat 196..219 CDD:275380 6/28 (21%)
TPKR_C2 228..277 CDD:301599 11/54 (20%)
IG_like 294..390 CDD:214653 18/95 (19%)
Ig 296..387 CDD:143165 18/90 (20%)
iglr-3NP_001293349.1 LRR <47..>196 CDD:227223 44/167 (26%)
leucine-rich repeat 51..73 CDD:275380 7/24 (29%)
leucine-rich repeat 74..97 CDD:275380 5/22 (23%)
leucine-rich repeat 98..119 CDD:275380 9/20 (45%)
leucine-rich repeat 120..141 CDD:275380 4/25 (16%)
leucine-rich repeat 142..163 CDD:275380 7/30 (23%)
leucine-rich repeat 164..185 CDD:275380 5/20 (25%)
Ig_3 243..319 CDD:372822 16/95 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 66 1.000 Inparanoid score I3947
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
32.920

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