DRSC/TRiP Functional Genomics Resources

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Protein Alignment kek4 and Rtn4r

DIOPT Version :9

Sequence 1:NP_001260435.1 Gene:kek4 / 34718 FlyBaseID:FBgn0032484 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_446065.1 Gene:Rtn4r / 113912 RGDID:620810 Length:473 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek4NP_001260435.1 leucine-rich repeat 75..99 CDD:275380
LRR_8 99..158 CDD:290566
leucine-rich repeat 100..123 CDD:275380
leucine-rich repeat 124..147 CDD:275380
LRR_8 146..206 CDD:290566
leucine-rich repeat 148..171 CDD:275380
leucine-rich repeat 172..195 CDD:275380
leucine-rich repeat 196..219 CDD:275380
TPKR_C2 228..277 CDD:301599
IG_like 294..390 CDD:214653
Ig 296..387 CDD:143165
Rtn4rNP_446065.1 LRR 1. /evidence=ECO:0000255 56..79
LRR_8 60..115 CDD:290566
leucine-rich repeat 60..82 CDD:275380
LRR 2. /evidence=ECO:0000255 80..103
LRR_RI 81..>261 CDD:238064
leucine-rich repeat 83..106 CDD:275380
LRR 3. /evidence=ECO:0000255 105..128
leucine-rich repeat 107..131 CDD:275380
LRR 4. /evidence=ECO:0000255 129..152
LRR_8 131..190 CDD:290566
leucine-rich repeat 132..155 CDD:275380
LRR 5. /evidence=ECO:0000255 153..176
LRR_4 156..195 CDD:289563
leucine-rich repeat 156..179 CDD:275380
LRR 6. /evidence=ECO:0000255 178..200
LRR_8 179..238 CDD:290566
leucine-rich repeat 180..203 CDD:275380
LRR 7. /evidence=ECO:0000255 202..224
leucine-rich repeat 204..227 CDD:275380
LRR 8. /evidence=ECO:0000255 225..248
leucine-rich repeat 228..251 CDD:275380
LRR 9. /evidence=ECO:0000255 250..273
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 346..446
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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