DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kek4 and lrrc4

DIOPT Version :9

Sequence 1:NP_001260435.1 Gene:kek4 / 34718 FlyBaseID:FBgn0032484 Length:649 Species:Drosophila melanogaster
Sequence 2:XP_002939414.1 Gene:lrrc4 / 100493671 XenbaseID:XB-GENE-968937 Length:641 Species:Xenopus tropicalis


Alignment Length:690 Identity:136/690 - (19%)
Similarity:234/690 - (33%) Gaps:233/690 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 CHCKWNSGKKTADCRNLSLSGVPEYLSPEVQVLDLSHNHIFYLEENAFLTTHLQNLQKLLIRNGT 109
            |.|. |...|.. |....||.||:.:....:.|:|..|:|..::.:.|  .||.:|:.|.:...:
 Frog    44 CSCS-NQFSKVV-CTRRGLSEVPQGIPSNTRSLNLMENNIQMIQADTF--RHLHHLEVLQLGRNS 104

  Fly   110 LKYLNQRSFTQLQILIELDLSNNLLVDLLPNVFDCLSKVRAIFLNGN------------------ 156
            ::.:...:|..|..|..|:|.:|.|..:....|:.|||:|.::|..|                  
 Frog   105 IRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMR 169

  Fly   157 -------LLQALRHGVFR---NLKYLH-------------------KIELKRNRLVSIDAKAFVG 192
                   .|:.:..|.|.   |||||:                   ::|:..|....|...:|.|
 Frog   170 LDLGELKKLEYISEGAFEGLYNLKYLNLGMCNIRDMPNLTPLVGLEELEISGNNFPEIKPGSFHG 234

  Fly   193 VPLLSQIYLDNNELTKLRVESFQDLTKLTALSLV------------------------ENPWNCT 233
            :..|.::::.|:::..:...:|.|||.|..|:|.                        .|||:|.
 Frog   235 LRSLKKLWIMNSQINTIERNAFDDLTSLVELNLAHNNVTSLPHDLFAPLKYLVELHLHHNPWDCD 299

  Fly   234 CDL----QMFRDFVIGMNLYTPPTS------CHYPLQLRGRLWIEDQPEAFACKPKIVYPTLSTS 288
            ||:    ...|:::        ||:      ||.|..:||:..:|.....|.|....:... ...
 Frog   300 CDVLWLSWWLREYI--------PTNSTCCGRCHSPPHMRGKYVVEVDHSMFQCSAPFIMDA-PRD 355

  Fly   289 INTSKENVT-LICRVHGSPNTVIAWDYTNQVYESRSKPVKSLQKQRIYIELLREDESKIRKFGHD 352
            :|.|:..:. |.||.  |..:.:.|                         ||...........| 
 Frog   356 LNISEGRMAELKCRT--SAMSSVRW-------------------------LLPNGTVLTHASNH- 392

  Fly   353 VFVSRLTIVN--------ARKSDEGVYTCLAENPGGKDSVHISVVVQKDMERISLIDSNFFAIVC 409
               .|:||:|        ...:|.|||||:..|..|..:.  |..:......::..:.:||..|.
 Frog   393 ---PRITILNDGTLNFSQVLLTDTGVYTCMVTNVAGNSNA--SAYLNVSTAELNTSNYSFFTTVT 452

  Fly   410 L----IAMGFLSMSILFSLVTCLIFKRFKQFHPG-QHTYLQPTSLPVQSPGSEEATAISALSSG- 468
            :    :|...:||          |||.......| |..|...|::.:|:....:..|:....:| 
 Frog   453 VETTEVAPEDISM----------IFKPVPTTSTGYQPAYTTTTTVLIQTTKMPKQVAVPTSDAGD 507

  Fly   469 --------VIRESKIVLDPLSAINEPSNKNYTLFKTSNSNGSEYMHTRNYKDVRLNSNTYTENLD 525
                    |::.:||::....|:...:.....:|               ||              
 Frog   508 KMQTSLDEVMKTTKIIIGCFVAVTLLAAAMLIVF---------------YK-------------- 543

  Fly   526 NQAESISSRNRELYSNIAGDREKEELKQKDELDKDSRQSSLQSTGCSRKKGQIDELQPDLLPSTQ 590
                 :..|::: .|.:|..|..|.:    ::|:|                         :||..
 Frog   544 -----LRKRHQQ-RSTVAAARTVEII----QVDED-------------------------IPSGS 573

  Fly   591 PTALKNINETFGPSAKKAEVNPRSKYNTNVQKYLKEKYGS 630
            ||         |.|.:.|.|.|....:.|...|....:|:
 Frog   574 PT---------GVSGEGAVVLPTIHDHMNYNTYKPAHHGA 604

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek4NP_001260435.1 leucine-rich repeat 75..99 CDD:275380 7/23 (30%)
LRR_8 99..158 CDD:290566 16/83 (19%)
leucine-rich repeat 100..123 CDD:275380 4/22 (18%)
leucine-rich repeat 124..147 CDD:275380 7/22 (32%)
LRR_8 146..206 CDD:290566 20/106 (19%)
leucine-rich repeat 148..171 CDD:275380 8/50 (16%)
leucine-rich repeat 172..195 CDD:275380 6/41 (15%)
leucine-rich repeat 196..219 CDD:275380 5/22 (23%)
TPKR_C2 228..277 CDD:301599 16/58 (28%)
IG_like 294..390 CDD:214653 21/104 (20%)
Ig 296..387 CDD:143165 20/99 (20%)
lrrc4XP_002939414.1 LRRNT 40..71 CDD:214470 9/28 (32%)
LRR <68..285 CDD:227223 45/218 (21%)
leucine-rich repeat 71..94 CDD:275380 7/24 (29%)
leucine-rich repeat 95..118 CDD:275380 4/22 (18%)
leucine-rich repeat 119..142 CDD:275380 7/22 (32%)
leucine-rich repeat 143..166 CDD:275380 3/22 (14%)
leucine-rich repeat 167..191 CDD:275380 3/23 (13%)
leucine-rich repeat 192..213 CDD:275380 4/20 (20%)
leucine-rich repeat 214..237 CDD:275380 5/22 (23%)
leucine-rich repeat 238..261 CDD:275380 5/22 (23%)
leucine-rich repeat 262..283 CDD:275380 3/20 (15%)
LRRCT 294..345 CDD:214507 16/58 (28%)
IG_like 353..435 CDD:214653 23/114 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm49155
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.