DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kek4 and lrfn1

DIOPT Version :10

Sequence 1:NP_609615.2 Gene:kek4 / 34718 FlyBaseID:FBgn0032484 Length:649 Species:Drosophila melanogaster
Sequence 2:XP_002940407.1 Gene:lrfn1 / 100487064 XenbaseID:XB-GENE-6045969 Length:742 Species:Xenopus tropicalis


Alignment Length:642 Identity:133/642 - (20%)
Similarity:215/642 - (33%) Gaps:192/642 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 KIYCLALIFRSASADWLLDC-GNCHCKWNSGKKTADCRNLSLSGVPEYLSPEVQVLDLSHNHIFY 86
            |:.||.::......:....| |.|.|:.||...|..|....|..||..:......|.|:.|    
 Frog     3 KLLCLLVMGALGYVEATQHCPGRCLCQSNSPTLTMLCAKTGLLFVPPAIDRRTVELRLTDN---- 63

  Fly    87 LEENAFLTTHLQNLQKLLIRNGTLKYLNQRSFTQLQILIELDLSNNLLVDLLPNVFDCLSKVRAI 151
                 |:|         :||        ::.|..:..|:.|.||.|.:..::|..|..|..:||:
 Frog    64 -----FIT---------IIR--------RKDFANMTNLVHLTLSRNTISQIVPLAFFDLRSLRAL 106

  Fly   152 FLNGNLLQALRHGVFRNLKYLHKIELKRNRLVSIDAKAFV-----------------GVPL---- 195
            .:|.|.|..|||..||.|..|..:.|..|::..|...|||                 .:|.    
 Frog   107 HMNSNRLSLLRHEHFRGLGNLRHLILGNNQISFIQPGAFVEFLSTVEDLDLSYNNLEELPWEDIG 171

  Fly   196 ----LSQIYLDNNELTKLRVESFQDLTKLT----------------------------------- 221
                |:.:.||:|.:..:...:|..|.||.                                   
 Frog   172 QMVNLNTLTLDHNLIDHIAEGTFTMLHKLVRLDMTSNQLHKLPPDNLFLRSQVLANARGSSPSSL 236

  Fly   222 ALSLVENPWNCTCDLQMFRDFVIGMNLYTPPTSCHYPLQLRGRLWIEDQPEAFACKPKIVYPTLS 286
            |:|...||.:|.|:|...|......:|.|    |..|.||..:.:...|.|.|.|.|.::     
 Frog   237 AISFGGNPLHCNCELLWLRRLTREDDLET----CASPEQLTDKYFWSIQEEEFICDPPLI----- 292

  Fly   287 TSINTSK------ENVTLICRVHGSPNTVIAWDYTNQVYESRSKPVKSLQKQRIYIELLREDESK 345
            |....||      ::|:|.|:..|.|...|.|      .....|.:.:..:      |:..|...
 Frog   293 TRHYASKPFVMEGQSVSLKCKAVGDPEPSIHW------IAPDGKLIHNTTR------LVAHDNGS 345

  Fly   346 IRKFGHDVFVSRLTIVNARKSDEGVYTCLAENPGGKDSVHISVVVQKDMERISLIDSNFFAIVCL 410
            :     |:.::.|       .|.|.:||:|.|..|:.:..:.:.:..    :.|:.:|...|   
 Frog   346 L-----DIMITTL-------KDSGSFTCIASNAAGEATAPVELAIVP----LPLLVNNTAHI--- 391

  Fly   411 IAMGFLSMSILFSLVTCLIFKRFKQFHPGQHTYLQPTSLPVQSPGSEEATAISALSSGVIRESKI 475
                                   |:..||.......|     .||..:..:        ..:.:|
 Frog   392 -----------------------KEQDPGSSDITTST-----KPGFNDTKS--------HHDRRI 420

  Fly   476 VLDPLSAINEPSNKNYTLFKTSNSNGSEYMHTRNYKDVRLNSNTYTENLDNQA--ESISSRNRE- 537
            |:|.|.               |.|...::...|:...:|:....|..:||:..  ..|...||. 
 Frog   421 VVDKLK---------------STSVVIQWPSERHIPGIRMYQIQYNSSLDDSLVYRMIPPSNRSF 470

  Fly   538 LYSNIAGDREKEELKQKDELDKDSRQSSLQSTGCSR-----KKGQIDELQPDLLPST 589
            |.:::|..||.:........|..:..::.:..||.:     :.||...|....|..|
 Frog   471 LVNDLAPGREYDLCVLAVYDDGMTALTATRVVGCVQFSTRDESGQCQPLHTQFLGGT 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek4NP_609615.2 LRR 59..>228 CDD:443914 48/228 (21%)
leucine-rich repeat 75..99 CDD:275380 5/23 (22%)
LRR_8 98..158 CDD:404697 15/59 (25%)
leucine-rich repeat 100..123 CDD:275380 3/22 (14%)
leucine-rich repeat 124..147 CDD:275380 8/22 (36%)
leucine-rich repeat 148..171 CDD:275380 11/22 (50%)
leucine-rich repeat 172..195 CDD:275380 7/39 (18%)
leucine-rich repeat 196..219 CDD:275380 6/22 (27%)
LRRCT 228..277 CDD:214507 15/48 (31%)
IG_like 294..390 CDD:214653 19/95 (20%)
Ig strand B 296..300 CDD:409353 2/3 (67%)
Ig strand C 309..323 CDD:409353 2/13 (15%)
Ig strand E 356..360 CDD:409353 1/3 (33%)
Ig strand F 370..375 CDD:409353 2/4 (50%)
Ig strand G 383..386 CDD:409353 0/2 (0%)
lrfn1XP_002940407.1 leucine-rich repeat 55..78 CDD:275380 8/48 (17%)
LRR <57..>215 CDD:443914 43/183 (23%)
leucine-rich repeat 79..102 CDD:275380 8/22 (36%)
leucine-rich repeat 103..126 CDD:275380 11/22 (50%)
leucine-rich repeat 127..151 CDD:275380 7/23 (30%)
leucine-rich repeat 152..175 CDD:275380 1/22 (5%)
leucine-rich repeat 176..199 CDD:275380 6/22 (27%)
leucine-rich repeat 200..218 CDD:275380 1/17 (6%)
LRRCT 243..288 CDD:214507 15/48 (31%)
Ig 290..378 CDD:472250 22/116 (19%)
Ig strand B 308..312 CDD:409353 2/3 (67%)
Ig strand C 321..325 CDD:409353 2/9 (22%)
Ig strand E 344..348 CDD:409353 0/8 (0%)
Ig strand F 358..363 CDD:409353 2/4 (50%)
Ig strand G 371..374 CDD:409353 0/2 (0%)
fn3 418..492 CDD:394996 18/88 (20%)

Return to query results.
Submit another query.