DRSC/TRiP Functional Genomics Resources

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Protein Alignment Edem2 and AT1G27520

DIOPT Version :9

Sequence 1:NP_609611.1 Gene:Edem2 / 34714 FlyBaseID:FBgn0032480 Length:801 Species:Drosophila melanogaster
Sequence 2:NP_564288.1 Gene:AT1G27520 / 839643 AraportID:AT1G27520 Length:574 Species:Arabidopsis thaliana


Alignment Length:563 Identity:213/563 - (37%)
Similarity:306/563 - (54%) Gaps:75/563 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VRGQRLMLIFLVAMCIVVACVLSTETTMPTQNMSNKERAELREEARDMFYHAYNAYMQNAYPADE 74
            :..:||.|..|:::...|        ..|:......::.::||:.|:||||||:.||..|:|.||
plant     5 IHPRRLFLCLLISLTFFV--------VDPSSQHIEVKKKQMREKVREMFYHAYDNYMTYAFPHDE 61

  Fly    75 LMPLSCKGRYRGVTPSRGDMDDILGNF------------SMTLVDTLDTLVLLGDFTEFDHAVKL 127
            |.||         |.|..|....|||.            ::|||::|.:|.:||:.|||:..|..
plant    62 LKPL---------TKSFTDSLSELGNLKLEHLPTDYNGSAVTLVESLSSLAILGNSTEFEKGVLW 117

  Fly   128 VIRDVQFDSDIIVSVFETNIRMVGGLLSAHILA-----EYLQKHADTMHWYKGELLEMSRELGYR 187
            :..::.||.|..|::||.|||::|||:|||:||     ..:|..      |..:||.::.:||.|
plant   118 LSENLTFDIDARVNLFECNIRVLGGLISAHLLAIDPNNRLIQGS------YNNQLLRLAEDLGKR 176

  Fly   188 LLPAFNTSTGIPHARVNLRLGMKDPMLKKSRETCTACAGTILLEFAALSRLTGDPIFEVRAHAAM 252
            .||||.|.||:|:|.:||:.|:   |..::.||.|:..|:::||..|||||||||.||..|..|:
plant   177 FLPAFETPTGLPYAWINLKNGV---MENETTETSTSGCGSLVLEMGALSRLTGDPRFESAALRAL 238

  Fly   253 DALWKLRHRGSDLMGTVLNVHSGDWVRRDSGVGAGIDSYYEYLFKSYVLLGDDKYLARFNRHYNA 317
            ..||::| ...||:||.|:|.:|:|:...|.:|||:||:||||.|:|:|.|.:.|...|:..|.|
plant   239 RQLWRMR-SSLDLLGTTLDVVTGEWIEYSSSIGAGVDSFYEYLLKAYILFGKEDYWRMFHSAYLA 302

  Fly   318 VMKYVSEGPMLLDVLMHRPHAKSKN----FMDSLLAFWPGLQVLSGDLKPAVQTHEMLYQVMQMH 378
            ..||...||.     .|..:..|..    .:.||.|||||||||.||:..|..:|...:.|.:..
plant   303 SQKYFRHGPW-----YHEANMWSGKPTYWQLTSLQAFWPGLQVLVGDIAAANSSHREFFHVWEKF 362

  Fly   379 TFIPEAFTVDFQ-IH--WGQHPLRPEFIESTYFLYRATGDHHYLQVGKKALKTLQQHAKVSCGYA 440
            ..:||.:.:|.| ||  ...:|||||..|||::||:||.|..||.||:..:|:|..:.||..|:|
plant   363 GVLPERYLLDHQIIHPTMKYYPLRPELAESTFYLYQATKDPWYLDVGESMVKSLNLYTKVPGGFA 427

  Fly   441 AVNDVRTGKHEDRMDSFVLSETIKYLFLLFSDPQDLIINVDEFVFTTEAHLLPLSIAQ------- 498
            :|.||.|.:.||...||.|:||.|||:|||.|.   .:....::||||.|  |:.:..       
plant   428 SVRDVTTMQLEDHQHSFFLAETCKYLYLLFDDS---FVAKRNYIFTTEGH--PIQVVSSWHEKLP 487

  Fly   499 ----LGNATFSFRQTDEHNVLDF-MRTCP--SSNRLFPEKVRK 534
                .||.|.|.....|...... ::.||  |.|...||:.|:
plant   488 ETYFSGNWTLSKSGAWESRASALSLQVCPLISLNSRHPEQQRE 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Edem2NP_609611.1 Glyco_hydro_47 57..494 CDD:279825 191/460 (42%)
PA_EDEM3_like 645..770 CDD:239041
AT1G27520NP_564288.1 Glyco_hydro_47 44..476 CDD:366693 191/460 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 384 1.000 Inparanoid score I521
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D434316at2759
OrthoFinder 1 1.000 - - FOG0000713
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
65.930

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