DRSC/TRiP Functional Genomics Resources

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Protein Alignment Edem2 and AT5G43710

DIOPT Version :9

Sequence 1:NP_609611.1 Gene:Edem2 / 34714 FlyBaseID:FBgn0032480 Length:801 Species:Drosophila melanogaster
Sequence 2:NP_199184.1 Gene:AT5G43710 / 834391 AraportID:AT5G43710 Length:624 Species:Arabidopsis thaliana


Alignment Length:544 Identity:226/544 - (41%)
Similarity:319/544 - (58%) Gaps:64/544 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 QNMSNKERAELREEARDMFYHAYNAYMQNAYPADELMPLSCKGRYRGVTPSRGDMDDILGNFSMT 104
            :::...|..:||:|.|.|||||::.||.||:|.|||.||||:|            :|.||.:::|
plant    30 ESVKPDEAKQLRDEVRGMFYHAFDGYMNNAFPLDELRPLSCQG------------EDTLGGYALT 82

  Fly   105 LVDTLDTLVLLGDFTEFDHAVKLVIRDVQFDSDIIVSVFETNIRMVGGLLSAHILAEYLQKHADT 169
            |:|:||||.||||...|..:|:.:.:::||:.:..||||||.||::|||||||::|   ..:|..
plant    83 LIDSLDTLALLGDRERFTSSVEWIGKNLQFNINKTVSVFETTIRVLGGLLSAHLIA---SDYATG 144

  Fly   170 MH--WYKGELLEMSRELGYRLLPAFNTSTGIPHARVNLRLGMKDPMLKKSRETCTACAGTILLEF 232
            |.  .|..|||.::..|..|:||||:|.||||...|||..|:..   .:|:.|.||..||:.|||
plant   145 MRIPSYNNELLVLAENLARRMLPAFDTPTGIPFGSVNLMYGVDK---HESKITSTAGGGTLSLEF 206

  Fly   233 AALSRLTGDPIFEVRAHAAMDALWKLRHRGSDLMGTVLNVHSGDWVRRDSGVGAGIDSYYEYLFK 297
            ..|||||.||:||..|..|:..|| .|....||:|..:||.:|:|.::|:|:|..|||:||||.|
plant   207 GVLSRLTNDPVFEQVAKNAVRGLW-ARRSNLDLVGAHINVFTGEWTQKDAGIGTSIDSFYEYLLK 270

  Fly   298 SYVLLGDDKYLARFNRHYNAVMKYVSEGPMLLDVLMHRPHAKSKNFMDSLLAFWPGLQVLSGDLK 362
            :|:|.||::||..|...|.:.|:|:.:.|..::|.|.........| :||.|||||||||:||:.
plant   271 AYILFGDEEYLYIFQEAYRSAMQYLHKDPWYVEVNMDSAAIVWPVF-NSLQAFWPGLQVLAGDVD 334

  Fly   363 PAVQTHEMLYQVMQMHTFIPEAFTV-DFQIHWGQ--HPLRPEFIESTYFLYRATGDHHYLQVGKK 424
            ||::||...:.|.:.:.|.||.|.: ...:.:||  :|||||.|||||:||:||.|..||..|:.
plant   335 PAIRTHTAFFSVWKRYGFTPEGFNLATLSVQYGQKSYPLRPELIESTYWLYKATRDPRYLDAGRD 399

  Fly   425 ALKTLQQHAKVSCGYAAVNDVRTGKHEDRMDSFVLSETIKYLFLLFSDPQDLIINVD-------- 481
            .:.:||..||..|||..:.||...|.||.|:||.|:||:|||:|||    ||.::.|        
plant   400 FVASLQYGAKCPCGYCHITDVELHKQEDHMESFFLAETVKYLWLLF----DLAVDSDNLVDNGPY 460

  Fly   482 EFVFTTEAHLLPLSIAQLGNATFSFRQTDEHNVLDFMRTCPS-SNRL-----------------F 528
            :::|:||.||||:: .|:..|.       || ...|...||| |.:|                 :
plant   461 KYIFSTEGHLLPIT-PQISLAR-------EH-CSYFGGYCPSNSTKLEQEVLGEDSSNDDHSNDY 516

  Fly   529 PEKVRKPLRNFITGSCPRTTAGKR 552
            |.....|:...|.|.||..|..::
plant   517 PYHESFPVTGLIKGLCPGLTHAQK 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Edem2NP_609611.1 Glyco_hydro_47 57..494 CDD:279825 203/449 (45%)
PA_EDEM3_like 645..770 CDD:239041
AT5G43710NP_199184.1 Glyco_hydro_47 47..473 CDD:279825 203/449 (45%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 384 1.000 Inparanoid score I521
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D434316at2759
OrthoFinder 1 1.000 - - FOG0000713
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45679
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.070

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