DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Edem2 and man1a1

DIOPT Version :10

Sequence 1:NP_609611.1 Gene:Edem2 / 34714 FlyBaseID:FBgn0032480 Length:801 Species:Drosophila melanogaster
Sequence 2:XP_694435.2 Gene:man1a1 / 566078 ZFINID:ZDB-GENE-041014-321 Length:618 Species:Danio rerio


Alignment Length:491 Identity:160/491 - (32%)
Similarity:244/491 - (49%) Gaps:87/491 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 ERAELREEARDMFYHAYNAYMQNAYPADELMPLSCKGRYRGVTPSRGDMDDILGNF-SMTLVDTL 109
            :||:::|    |...|::.|...|:.::||.|:|          .:|...::.|:. ..|:||.|
Zfish   160 KRAKIKE----MMQFAWDNYKHYAWGSNELRPVS----------KQGHSSNLFGSLKGATIVDAL 210

  Fly   110 DTLVLLGDFTEFDHAVKLVIRDVQFDSDIIVSVFETNIRMVGGLLSAHILA--EYLQKHADTMHW 172
            |||.::..:.||:.|.:.|.:::.|:.:..:||||.|||.|||||||:.|:  |..:|.|     
Zfish   211 DTLYIMEMYDEFEAATEWVEKNLDFNMNAEISVFEVNIRFVGGLLSAYYLSGKEVFRKKA----- 270

  Fly   173 YKGELLEMSRELGYRLLPAFNTSTGIPHARVNLRLGM-KDPMLKKSRETCTACAGTILLEFAALS 236
                     .|||.:|||||.|.||:|.|.:||:.|: ::........:..|..||:.|||..||
Zfish   271 ---------VELGEKLLPAFKTPTGVPWALLNLKSGVGRNWPWASGGSSILAEYGTLHLEFMHLS 326

  Fly   237 RLTGDPIFEVRAHAAMDALWKLRHRGSDLMGTVLNVHSGDWVRRDSGVGAGIDSYYEYLFKSYVL 301
            .|:|.|:|..:.......|.:| .:...|....||.:||.|.:....||...||:||||.|::::
Zfish   327 ALSGRPVFAEKVMNIRKVLTRL-DKPQGLYPNYLNPNSGQWGQHHVSVGGLGDSFYEYLLKAWLM 390

  Fly   302 LGDDKYLARFNR-HYNAV--------------MKYVSE--GPMLLDVLMHRPHAKSKNFMDSLLA 349
              .||......: :|:|:              :.|::|  |.:|            ::.|..|..
Zfish   391 --SDKIDEEGKKLYYDALQAIEKNLIRKSSGGLTYIAEWKGGLL------------EHKMGHLTC 441

  Fly   350 FWPGLQVLSGDLKPAVQT-HEMLYQVMQMHT----FI-------PEAFTVD---FQIHWGQHP-- 397
            |..|:..|..|..|..:| |:|........|    ::       ||||..|   ..|...|:.  
Zfish   442 FAGGMIALGADGAPDEKTGHQMELAAEIARTCHESYVRTNLKLGPEAFRFDGGVEAIATRQNEKY 506

  Fly   398 --LRPEFIESTYFLYRATGDHHYLQVGKKALKTLQQHAKVSCGYAAVNDVRTG--KHEDRMDSFV 458
              ||||.||:..:::|.|.|..|.|.|.:|::.|::|.:|..||:.|.||.:.  .|:|...||.
Zfish   507 FILRPEVIETYMYMWRFTHDPKYRQWGWEAVQALEKHCRVEGGYSGVRDVYSNNPNHDDVQQSFY 571

  Fly   459 LSETIKYLFLLFSDPQDLIINVDEFVFTTEAHLLPL 494
            |:||:|||:|||||...|  ..|.:||.||||.||:
Zfish   572 LAETLKYLYLLFSDDDHL--PFDHWVFNTEAHPLPV 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Edem2NP_609611.1 Glyco_hydro_47 57..494 CDD:460241 156/478 (33%)
PA_EDEM3_like 645..770 CDD:239041
man1a1XP_694435.2 Glyco_hydro_47 167..605 CDD:460241 156/478 (33%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.