DRSC/TRiP Functional Genomics Resources

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Protein Alignment Edem2 and edem2

DIOPT Version :10

Sequence 1:NP_609611.1 Gene:Edem2 / 34714 FlyBaseID:FBgn0032480 Length:801 Species:Drosophila melanogaster
Sequence 2:NP_001005031.1 Gene:edem2 / 448548 XenbaseID:XB-GENE-941890 Length:555 Species:Xenopus tropicalis


Alignment Length:549 Identity:205/549 - (37%)
Similarity:312/549 - (56%) Gaps:56/549 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 QNMSNKERAELREEARDMFYHAYNAYMQNAYPADELMPLSCKGRYRGVTPSRGDMDDILGNFSMT 104
            :.::.:|.|:.|:..:.|||||||.|:.:|:|.|||.||:|.|:            |..|:||:|
 Frog    25 RGLTEEEMAQYRDRVKSMFYHAYNNYLDHAFPYDELRPLTCDGQ------------DTWGSFSLT 77

  Fly   105 LVDTLDTLVLLGDFTEFDHAVKLVIRDVQFDSDIIVSVFETNIRMVGGLLSAHILAEYLQKHADT 169
            |:|.||||:::|:.|||...|.::...:.||.|:..||||||||:||||||||:.::......:.
 Frog    78 LIDALDTLLIIGNVTEFQRVVNVLQDTLDFDIDVNASVFETNIRVVGGLLSAHLFSKRAGLELEP 142

  Fly   170 MHWYKGELLEMSRELGYRLLPAFNTSTGIPHARVNLRLGMKDPMLKKSRETCTACAGTILLEFAA 234
            .....|.||.|:.|...:|||||:|:||:|:..|||..|:..   .::..||||..||.::|||.
 Frog   143 GWPCTGPLLRMAEEAARKLLPAFDTATGMPYGTVNLLRGVNP---TETPVTCTAGVGTFIVEFAT 204

  Fly   235 LSRLTGDPIFEVRAHAAMDALWKLRHRGSD--LMGTVLNVHSGDWVRRDSGVGAGIDSYYEYLFK 297
            ||||||||.||:.|..|:..||:.|   ||  |:|..::|.:..||.:|:|:|||:|||:|||.|
 Frog   205 LSRLTGDPQFEMVARRALRGLWESR---SDIGLVGNHVDVMTSKWVAQDAGIGAGVDSYFEYLVK 266

  Fly   298 SYVLLGDDKYLARFNRHYNAVMKYVSEGPMLLDVLMHRPHAKSKNFMDSLLAFWPGLQVLSGDLK 362
            ..:||.|::.::.|..:..|:..:.......:.|.|::.......| .||.|||||||.|.||::
 Frog   267 GAILLQDEELMSMFLEYNKALQNFTKYDDWYVWVQMYKGTVTMPVF-QSLEAFWPGLQSLVGDIR 330

  Fly   363 PAVQTHEMLYQVMQMHTFIPEAFTV--DFQIHWGQ-HPLRPEFIESTYFLYRATGDHHYLQVGKK 424
            ..:::....|.|.:....:||.:::  .|.:...: :|||||.|||..:||:||.|...|::|:.
 Frog   331 SGMRSFLNYYTVWRQFGGLPEFYSIPQGFTVEKREGYPLRPELIESAMYLYKATRDPILLELGRD 395

  Fly   425 ALKTLQQHAKVSCGYAAVNDVRTGKHEDRMDSFVLSETIKYLFLLFSDPQDLIIN---------- 479
            |::::::.:||.||:|.:.|||..|.::||:||.|:||||||:||| ||.:.|.|          
 Frog   396 AVESIERISKVDCGFATIKDVRDHKLDNRMESFFLAETIKYLYLLF-DPDNFIHNDGSTSDLVVT 459

  Fly   480 --------VDEFVFTTEAHLLPLSIAQLGNATFSFRQTDEHNVLDFMR--------TCPSSNRLF 528
                    ...:||.||||  |:..|.|......  ..::..|.|.:|        :.|.:.:..
 Frog   460 PYGECVMGAGGYVFNTEAH--PIDPAALHCCKRD--SAEQWEVEDLVREFFSIKSSSNPKAQQHR 520

  Fly   529 PE-KVRKPLRNFITGSCPRTTAGKRLSAL 556
            |: :.|...:.....|||......:||.|
 Frog   521 PDSQNRNKSKRTSKLSCPSQPFTSKLSIL 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Edem2NP_609611.1 Glyco_hydro_47 57..494 CDD:460241 187/459 (41%)
PA_EDEM3_like 645..770 CDD:239041
edem2NP_001005031.1 Glyco_hydro_47 42..480 CDD:460241 187/459 (41%)
Blue background indicates that the domain is not in the aligned region.

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