DRSC/TRiP Functional Genomics Resources

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Protein Alignment Edem2 and alpha-Man-Ic

DIOPT Version :10

Sequence 1:NP_609611.1 Gene:Edem2 / 34714 FlyBaseID:FBgn0032480 Length:801 Species:Drosophila melanogaster
Sequence 2:NP_733331.1 Gene:alpha-Man-Ic / 318624 FlyBaseID:FBgn0051202 Length:526 Species:Drosophila melanogaster


Alignment Length:533 Identity:135/533 - (25%)
Similarity:225/533 - (42%) Gaps:107/533 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 IFLVAMCIV--VACVL----STETTMPTQNMSNKER--AELREEARDMFYHAYNAYMQNAYPADE 74
            ||.|.:.::  :.|..    |.:..:|:.:.|.|:.  .::|.:.::|..||:..|.:..:..:|
  Fly    31 IFTVGVIVITYIQCRAMMRESFQKNIPSNDNSLKDMNPDDMRAKIKEMMMHAWRNYARVVWGTNE 95

  Fly    75 LMPLSCKGRYRGVTPSRGDMDDILGNFSMTLVDTLDTLVLLGDFTEFDHAVKLVIRDVQFDS-DI 138
            ..|:|.:..:.|        |........|::::||||.|:|...|...:...:.:....|. |.
  Fly    96 FRPISRRVHFGG--------DFATYKLGATIIESLDTLHLMGLNKELRRSRDWIEKSFHLDRVDE 152

  Fly   139 IVSVFETNIRMVGGLLSAHILAEYLQKHADTMHWYKGELLEMSR--ELGYRLLPAFNTSTGIPHA 201
            .:||:|...|::..:|              |::...|:.|.|.:  .:..::||||:|.||||..
  Fly   153 ALSVYELTSRLLCPML--------------TLYSLTGDSLYMDKAIHIADKILPAFDTPTGIPRR 203

  Fly   202 RVNLRLGMKDPMLKK--SRETCTACAGTILLEFAALSRLTGDPIFEVRAHAAMDALWKLRHRGSD 264
            .|..:.|   ..|.|  |..:.|:..|::.|||..||.::|.|::..|..|..:.|.|.. |.:.
  Fly   204 LVVPKEG---STLTKYLSDISRTSEFGSLHLEFYYLSEVSGYPVYRERVDAIREILAKTT-RPNG 264

  Fly   265 LMGTVLNVHSGDWVRRDSGVGAGIDSYYEYLFKSYVLLG--DDKYLARFNRHYNAV--------- 318
            |.........|.|    ......:...|:.|.||::..|  |.:....|.....||         
  Fly   265 LYPNAYCTKFGKW----ENYNCSMHRLYDTLLKSWIQSGRTDTQNADTFKEAMLAVAQNLVVINP 325

  Fly   319 --MKYVS---EGPMLLDVLMHRPHAKSKNFMDSLLAFWPGLQVLSGDLKPAVQTHEMLYQVMQMH 378
              :.|||   .|     .|.||        |.....|..||.||.     |.:| :|.:.....|
  Fly   326 EDVTYVSTFRNG-----TLFHR--------MRHSDCFAGGLFVLG-----AAET-QMKHWEKYAH 371

  Fly   379 TFI------------------PE--AFTVDFQ-----IHWGQHPLRPEFIESTYFLYRATGDHHY 418
            ..|                  |:  |||.:.|     :....:.||||..|:...|:|.|....|
  Fly   372 IGIGLTDTCHDSYWSSPTRLGPDTFAFTEESQQEIEPLQRNYYNLRPEVAETYLVLWRITHHPQY 436

  Fly   419 LQVGKKALKTLQQHAKVSCGYAAVNDVR--TGKHEDRMDSFVLSETIKYLFLLFSDPQDLIINVD 481
            ...|.:.::.::::.::..||..|.||.  |.:.:|...||.|..|:|||:|||||  |.:::::
  Fly   437 RLWGLEMVQAIEKYCRMPYGYTGVMDVNNVTSEPDDVQGSFFLGSTLKYLYLLFSD--DDVVSLE 499

  Fly   482 EFVFTTEAHLLPL 494
            ::||.:..|.||:
  Fly   500 QWVFNSAGHFLPI 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Edem2NP_609611.1 Glyco_hydro_47 57..494 CDD:460241 125/484 (26%)
PA_EDEM3_like 645..770 CDD:239041
alpha-Man-IcNP_733331.1 Glyco_hydro_47 78..512 CDD:460241 125/484 (26%)
Blue background indicates that the domain is not in the aligned region.

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