DRSC/TRiP Functional Genomics Resources

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Protein Alignment Edem2 and mans-3

DIOPT Version :10

Sequence 1:NP_609611.1 Gene:Edem2 / 34714 FlyBaseID:FBgn0032480 Length:801 Species:Drosophila melanogaster
Sequence 2:NP_508877.1 Gene:mans-3 / 180787 WormBaseID:WBGene00020197 Length:584 Species:Caenorhabditis elegans


Alignment Length:513 Identity:146/513 - (28%)
Similarity:243/513 - (47%) Gaps:116/513 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 TMPTQNMSNKERAELREEARDMFYHAYNAYMQNAYPADELMPLSCKGRYRGVTPSRGDMDDILGN 100
            |.||   :::::|.::     .|.||:..|.:.|:..|.|.|         |:.|..|..|.   
 Worm   131 TGPT---NDRQKAVVK-----AFQHAWIGYKKYAWGHDTLKP---------VSKSYSDWFDT--- 175

  Fly   101 FSMTLVDTLDTLVLLGDFTEFDHAVKLVIRDVQFDSDIIVSVFETNIRMVGGLLSA-HILAEYLQ 164
             .:|:||.|||.:::|...|...|.:.:...:.|:.|.:|:.||..||::||::|| |:..    
 Worm   176 -GLTIVDGLDTAIIMGLEDEATEATEWIQNTLTFEKDRMVNFFECTIRVLGGMMSAFHLTG---- 235

  Fly   165 KHADTMHWYKGELLEMSRELGYRLLPAFNTSTGIPHARVNLRLGMKDPMLKKS-------RETCT 222
                     |...||.|.:||.|||.||.:.:.||::.|||        ||::       .::..
 Worm   236 ---------KKMFLEKSVDLGDRLLSAFKSPSPIPYSDVNL--------LKRTATNPQWGADSSL 283

  Fly   223 ACAGTILLEFAALSRLTGDPIFEVRAHAAMDALWKL---RHRGSDLMGTVLNVHSGDWVRRDSGV 284
            :...|:.||:.||||.:|:..:|.........:.|:   .|.|  |.|..:|.::|:: ::||.:
 Worm   284 SEVTTVQLEYRALSRASGNSTYEDLTFNVFKHIHKIGCETHEG--LCGMFINANTGNF-KKDSTI 345

  Fly   285 --GAGIDSYYEYLFKSYVLLGDDKYLARFNRHYNAVMKYVSEGPMLLDVLMHRPHAKSKNF---- 343
              ||..||:||||||.::..|  |.:......|...||       .::..::|....:|.|    
 Worm   346 TFGARSDSFYEYLFKQWIQTG--KTIDWLKEDYGKAMK-------AMEKYLYRNSKPNKMFFIGE 401

  Fly   344 ----------MDSLLAFWPGLQVLSGDLKPAVQTHEMLYQVMQM--------HTFIPEAFTVDFQ 390
                      ||.|:.|      ::|.|....| |....:.:.|        |........:..:
 Worm   402 LLSGQTYSPKMDHLVCF------IAGTLSQGSQ-HGFPRKHLDMAEKIGETCHNMYDNPTGLGPE 459

  Fly   391 I-HWGQHP---------------LRPEFIESTYFLYRATGDHHYLQVGKKALKTLQQHAKV-SCG 438
            | |:...|               ||||.||:.::|||.|||..|.:.|..|.:.::::|:: :.|
 Worm   460 IAHFNMIPGKEDLYVKPLDAHCLLRPEAIEAWFYLYRFTGDKKYQEWGWSAFQAIEKYARIPTGG 524

  Fly   439 YAAVNDVR--TGKHEDRMDSFVLSETIKYLFLLFSDPQDLIINVDEFVFTTEAHLLPL 494
            |:::::|:  ..:..|.|:||:|.||.|||:||..|.| .::.:|::|||||.|.||:
 Worm   525 YSSISNVKQINVRFRDSMESFLLGETFKYLYLLLGDDQ-TVLPLDKWVFTTEGHPLPI 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Edem2NP_609611.1 Glyco_hydro_47 57..494 CDD:460241 141/490 (29%)
PA_EDEM3_like 645..770 CDD:239041
mans-3NP_508877.1 Glyco_hydro_47 144..581 CDD:460241 141/490 (29%)
Blue background indicates that the domain is not in the aligned region.

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