DRSC/TRiP Functional Genomics Resources

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Protein Alignment Edem2 and F10C2.5

DIOPT Version :10

Sequence 1:NP_609611.1 Gene:Edem2 / 34714 FlyBaseID:FBgn0032480 Length:801 Species:Drosophila melanogaster
Sequence 2:NP_506018.1 Gene:F10C2.5 / 179653 WormBaseID:WBGene00008646 Length:781 Species:Caenorhabditis elegans


Alignment Length:678 Identity:221/678 - (32%)
Similarity:348/678 - (51%) Gaps:108/678 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 IFLVAMCIVVACVLSTETTMPTQNMSNKERA---------ELREEARDMFYHAYNAYMQNAYPAD 73
            ||.:|:..::..  |.::..|    .||:.:         ..||:.:.|||||||.|:.:|:|.|
 Worm     7 IFFLALASIIQA--SDDSEAP----DNKKSSIRFTPSVIDSYREKVQKMFYHAYNGYLDHAFPLD 65

  Fly    74 ELMPLSCKGRYRGVTPSRGDMDDILGNFSMTLVDTLDTLVLLGDFTEFDHAVKLVIRDVQFDSDI 138
            ||.|::|.|:            |..|:||::|:|.||||:::|:.|||..||.||:...:.|:::
 Worm    66 ELKPITCVGQ------------DTWGSFSLSLIDALDTLLVMGNTTEFRRAVSLVLEKARDDANV 118

  Fly   139 IVSVFETNIRMVGGLLSAHILAEYLQKHADTMHWYKG-----ELLEMSRELGYRLLPAFNTSTGI 198
            .|||||||||:||||:|||:||   .:|.|.:..::|     .||:::.::..||:|||||.||:
 Worm   119 NVSVFETNIRVVGGLISAHMLA---GRHKDLVVDWEGYPCDSPLLKLAVKMADRLMPAFNTETGM 180

  Fly   199 PHARVNLRLGM-KDPMLKKSRETCTACAGTILLEFAALSRLTGDPIFEVRAHAAMDALWKLRHRG 262
            |:..|||:.|: ||    ::..||||..||.|:||..|||||||..:|..|..|:||||..| ..
 Worm   181 PYGTVNLKYGVHKD----ETPITCTAGVGTFLIEFGTLSRLTGDDKYEKVALKALDALWSTR-SP 240

  Fly   263 SDLMGTVLNVHSGDWVRRDSGVGAGIDSYYEYLFKSYVLLGDDKYLARFNRHYNAVMKYVSEGPM 327
            ..|:|..:||.:|.|...|||:|||:|||:|||.|...|......:.:|:.|..::.|:|.:|..
 Worm   241 IGLVGNHINVQTGQWTATDSGIGAGVDSYFEYLAKGAYLFRRPSLMKQFHEHATSINKHVRKGEW 305

  Fly   328 LLDVLMHRPHAKSKNFMDSLLAFWPGLQVLSGDLKPAVQTHEMLYQVMQMHTFIPEAFTVDFQIH 392
            .:.|.|.: .:.|.....||.|||||...:.||::.|.:......:|::.:.|.||.    :.||
 Worm   306 FMWVSMAK-GSVSLPIFQSLEAFWPGTLTMVGDVQDASRIMLTYSEVIRKYGFPPEF----YNIH 365

  Fly   393 -------WGQHPLRPEFIESTYFLYRATGDHHYLQVGKKALKTLQQHAKVSCGYAAVNDVRTGKH 450
                   ....|||||.:||..:|||||.|..:|::|.:.:..::..|:..||||.:|:|:....
 Worm   366 NEEPGEKRAAFPLRPEMVESLMYLYRATKDETWLELGAEMIDAIESSARTKCGYATINNVKEHSI 430

  Fly   451 EDRMDSFVLSETIKYLFLLF----------------SDPQDL--IINVDEFVFTTEAHLL----- 492
            ||||:||.|:||.|||:|||                :.|::|  :|....::|.||||.:     
 Worm   431 EDRMESFFLAETTKYLYLLFDPTNFIHSKGDQARILTSPKNLTCVIYGGGYIFNTEAHPVDPGML 495

  Fly   493 -----------PLSIAQLGNATFSFRQTDEHNVLDFMRTCPSSNRLFPEKVRK--PLRNFITGSC 544
                       .:.:.|:.|.       |||..::  ||.....:.|..:..|  .|..|.....
 Worm   496 DCCSVQAKRDQEVGVKQVNNG-------DEHEKMN--RTEKGGEKYFENQYGKNENLIEFEVDEK 551

  Fly   545 PRTTAGKRLSALDFQASNADHLRAVYDMGITMVSV----------GDRSQGKVRLFHSFYNAKSH 599
            .:..:.||...|:.:....:..:|:..:...:|..          |:.|....:|....|.|..:
 Worm   552 LKKESEKRKIELEAEKVKENSHKAMLKVREILVRAHQKDEAMQRNGETSDSARKLMDQLYKAYPN 616

  Fly   600 EEGEMGLQFMQEMLELTKMQSINQLAQL 627
            ...|:.....:.::|..::|.:..:.:|
 Worm   617 HTAELENLNKEAIIEFEELQHLEDIREL 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Edem2NP_609611.1 Glyco_hydro_47 57..494 CDD:460241 187/483 (39%)
PA_EDEM3_like 645..770 CDD:239041
F10C2.5NP_506018.1 Glyco_hydro_47 49..489 CDD:460241 186/464 (40%)
PTZ00121 <501..642 CDD:173412 24/149 (16%)
Blue background indicates that the domain is not in the aligned region.

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