DRSC/TRiP Functional Genomics Resources

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Protein Alignment Edem2 and C47E12.3

DIOPT Version :10

Sequence 1:NP_609611.1 Gene:Edem2 / 34714 FlyBaseID:FBgn0032480 Length:801 Species:Drosophila melanogaster
Sequence 2:NP_501802.2 Gene:C47E12.3 / 177857 WormBaseID:WBGene00008148 Length:568 Species:Caenorhabditis elegans


Alignment Length:594 Identity:213/594 - (35%)
Similarity:325/594 - (54%) Gaps:101/594 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FVRGQRLMLIFLVAMCIVVACVLSTETTMPTQNMSNKERAELR-------------EEARDMFYH 60
            ||:.   :|||:....  ..|.|.|     |:|.....:.|::             .:.|:||..
 Worm     3 FVKN---VLIFIALFS--TTCSLKT-----TKNPFLLTKEEIKYASISDVDLQYGLAKTREMFQF 57

  Fly    61 AYNAYMQNAYPADELMPLSCKGR-YRGVTPSRGDMDDILGNFSMTLVDTLDTLVLLGDFTEFDHA 124
            .::.||::|:|||||.|:.|:|| :....|...:::|:||::|:.|:||||:||:.||..||..|
 Worm    58 GWDNYMEHAFPADELDPIHCRGRGHDHDNPDNINVNDVLGDYSLGLIDTLDSLVVFGDADEFKRA 122

  Fly   125 VKLVIRDVQFDSDIIVSVFETNIRMVGGLLSAHILAEYLQKHADT--------MHWYKGELLEMS 181
            |.|||:.|.|:.:..|.|||:.||::||||:||::|      ||.        |..|.||||.::
 Worm   123 VNLVIKTVSFEKNTTVQVFESTIRVMGGLLAAHMIA------ADKTNRFGPFYMSDYGGELLTLA 181

  Fly   182 RELGYRLLPAFN-TSTGIPHARVNLRLGMKDPMLKKSRETCTACAGTILLEFAALSRLTGDPIFE 245
            .:|..||||||: |:||||:.|:||:.|:   :...:..|||:.||::||||..||:|.||..:|
 Worm   182 HDLAGRLLPAFDGTATGIPYTRINLQKGI---LPGTTNSTCTSGAGSLLLEFGVLSKLLGDDTYE 243

  Fly   246 VRAHAAMDALWKLRHRGSDLMGTVLNVHSGDWVRRDSGVGAGIDSYYEYLFKSYVLLGDDKYLAR 310
            ..|....:.||.||:..:.|.|.::::.:|:|:...:|:||||||:|||:.|||:|.|:.:.|..
 Worm   244 RLARRVNEKLWNLRNEVTGLHGNLIDIQTGEWLGHLAGLGAGIDSFYEYMLKSYILFGNQRDLDM 308

  Fly   311 FNRHYNAVMKYVSEG-----------PMLLDVLMHRPHAKSKNFMDSLLAFWPGLQVLSGDLKPA 364
            :|..:..:..|:..|           |:.::| ..|..:.|..::|||.|.:.|:.||:|::..|
 Worm   309 YNESFARITTYMRRGRSRCSSLEGDIPIYVNV-DSRDGSTSNTWIDSLQASFAGVLVLAGEVDEA 372

  Fly   365 VQTHEMLYQVMQMHTFIPEAFT-------VDFQIHWGQHPLRPEFIESTYFLYRATGDHHYLQVG 422
            |..|.:.|.:.:.:..:||.|.       |.|      :||||||:||||.||.||.:..|..||
 Worm   373 VCHHALYYAIWKKYGVLPERFNWQLQAPDVSF------YPLRPEFVESTYLLYTATKNPFYQHVG 431

  Fly   423 KKALKTLQQHAKVSCGYAAVNDVRTGKHEDRMDSFVLSETIKYLFLLFSDPQDLIINVDE---FV 484
            .:.|.:|:...:|.||:|.|:||..|..||||:||.||||:|||:|||.  .|..||.::   .:
 Worm   432 LEILDSLETITRVKCGFATVHDVIDGSLEDRMESFFLSETLKYLYLLFD--VDHPINKEQQESVL 494

  Fly   485 FTTEAHLLPLSIAQLGNATFSFRQTDEHNVLDFMRTCPSSNRLFPEKVRKPLRNFITGSCPRTTA 549
            |:||.|:.|:|      ..|:...|.                  |.:...||:     ..|||.:
 Worm   495 FSTEGHIFPIS------PLFNLPPTP------------------PSQYDPPLK-----PLPRTNS 530

  Fly   550 GKRLSALDF 558
            ....:|.||
 Worm   531 SFCETATDF 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Edem2NP_609611.1 Glyco_hydro_47 57..494 CDD:460241 188/467 (40%)
PA_EDEM3_like 645..770 CDD:239041
C47E12.3NP_501802.2 Glyco_hydro_47 54..504 CDD:460241 188/467 (40%)
Blue background indicates that the domain is not in the aligned region.

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