DRSC/TRiP Functional Genomics Resources

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Protein Alignment Edem2 and mans-1

DIOPT Version :10

Sequence 1:NP_609611.1 Gene:Edem2 / 34714 FlyBaseID:FBgn0032480 Length:801 Species:Drosophila melanogaster
Sequence 2:NP_492116.1 Gene:mans-1 / 172510 WormBaseID:WBGene00008411 Length:540 Species:Caenorhabditis elegans


Alignment Length:553 Identity:150/553 - (27%)
Similarity:237/553 - (42%) Gaps:112/553 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LIFLVAMCIVVACVLST---------------ETTMPTQNMSNKERAELREEA------------ 54
            ::||:.:||.....|.:               ...:..:.:..||:.|||.:|            
 Worm    15 VMFLLTVCITAFFFLPSGGADLYFREENSVHVRDVLIREEIRRKEQDELRRKAEEANPIPIPKPE 79

  Fly    55 --------------RDMFYHAYNAYMQNAYPADELMPLSCKGRYRGVTPSRGDMDDILGNFSMTL 105
                          :.|...|::.|.:.|:..:||.|.|..|....:..        .|....|:
 Worm    80 IGASDDAEGRRIFVKQMIKFAWDGYRKYAWGENELRPNSRSGHSSSIFG--------YGKTGATI 136

  Fly   106 VDTLDTLVLLGDFTEFDHAVKLVIRDVQFDSDI------IVSVFETNIRMVGGLLSAHILAEYLQ 164
            :|.:|||.|:|...|:..|     ||...|.|.      .:||||||||..||||||..|.    
 Worm   137 IDAIDTLYLVGLKEEYKEA-----RDWIADFDFKTSAKGDLSVFETNIRFTGGLLSAFALT---- 192

  Fly   165 KHADTMHWYKGELLEMSRELGYRLLPAFNTSTGIPHARVNLRLGMKDPMLKKSRETCTACAGTIL 229
              .|.|      .|:.:.::...|||||.|.:|||::.::.:.|........|.:...:..|:|.
 Worm   193 --GDKM------FLKKAEDVATILLPAFETPSGIPNSLIDAQTGRSKTYSWASGKAILSEYGSIQ 249

  Fly   230 LEFAALSRLTGDPIFEVRAHAAMDALWKLRHRGSDLMGTVLNVHSGD-WVRRDSGVGAGIDSYYE 293
            |||..||.|||:|:|..:|....|.|..: .:...|....:.:.:.. |.:....:||..||:||
 Worm   250 LEFDYLSNLTGNPVFAQKADKIRDVLTAM-EKPEGLYPIYITMDNPPRWGQHLFSMGAMADSWYE 313

  Fly   294 YLFKSYVLLG--DDKYLARFNRHYNAV-------MKYVSEGPMLLDVLMHRPHAKSKNFMDSLLA 349
            ||.|.::..|  ||    |..|.|...       |.:.||...|........:....:| :.|..
 Worm   314 YLLKQWIATGKKDD----RTKREYEEAIFAMEKRMLFKSEQSNLWYFAKMNGNRMEHSF-EHLAC 373

  Fly   350 FWPGLQVL--SGDLKPAVQTHEMLYQVMQMHT-----------FIPEAF----TVDFQIHWGQ-- 395
            |..|:.||  ..:....:..|.|.......||           ..||:|    :|:.:....|  
 Worm   374 FSGGMVVLHAMNEKNKTISDHYMTLGKEIGHTCHESYARSTTGIGPESFQFTSSVEAKTERRQDS 438

  Fly   396 -HPLRPEFIESTYFLYRATGDHHYLQVGKKALKTLQQHAKVSCGYAAVNDV--RTGKHEDRMDSF 457
             :.||||.:|:.::|:|||.|..|.|.....::.|:::.|.:.||:.:.:|  .:.:.:|...||
 Worm   439 YYILRPEVVETWFYLWRATKDEKYRQWAWDHVQNLEEYCKGTAGYSGIRNVYESSPEQDDVQQSF 503

  Fly   458 VLSETIKYLFLLFSDPQDLIINVDEFVFTTEAH 490
            :.:|..|||:|:||  :|.|:.:|::||.||||
 Worm   504 LFAELFKYLYLIFS--EDNILPLDQWVFNTEAH 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Edem2NP_609611.1 Glyco_hydro_47 57..494 CDD:460241 139/472 (29%)
PA_EDEM3_like 645..770 CDD:239041
mans-1NP_492116.1 Glyco_hydro_47 96..538 CDD:460241 139/472 (29%)
Blue background indicates that the domain is not in the aligned region.

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