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Protein Alignment CG16974 and Islr

DIOPT Version :9

Sequence 1:	NP_001246018.1	Gene:	CG16974 / 34713	FlyBaseID:	FBgn0032479	Length:	1257	Species:	Drosophila melanogaster
Sequence 2:	NP_001119772.1	Gene:	Islr / 686539	RGDID:	1596359	Length:	428	Species:	Rattus norvegicus

Alignment Length:	458	Identity:	97/458 - (21%)
Similarity:	143/458 - (31%)	Gaps:	179/458 - (39%)

- Green bases have known domain annotations that are detailed below.

  Fly   323 ADLQVLDLSDNRLLSFPDNFFARNGQLRQLHLQRNQLKSIGKHSLYSLRELRQLDLSQNSLSVID 387
            |::..|.||.|||....:..|.....|:.|.|..|:::|:...:|..|..|:.||||.|.:|...
  Rat    50 ANVTTLSLSANRLPVLLEGSFREVPLLQSLWLAHNEIRSVAVGALAPLGHLKSLDLSHNLISEFA 114

  Fly   388 RKAFESLDHLLALNVSGNNLTLLSSIIFQSLHALRQLDLSRNQFKQLPSGLFQRQRSLVLLRIDE 452
            .....:|..|..|.:..|.|..:....|:||||||.|.|:.|:...|..|
  Rat   115 WSDLHNLSALQLLKMDSNELAFIPRDAFRSLHALRSLQLNHNRLHALAEG--------------- 164

  Fly   453 TPIEQFSNWISRYDESLVDPQVLHRLRYLSVQQNRKLTYLPATLFANTPNIRELLLAENGLLQLP 517
                                                 |:.|.|
  Rat   165 -------------------------------------TFAPLT---------------------- 170

  Fly   518 TQISGLSRLQRLSVRGNSLGSLPENIKELRQLHYLNILGNEYQCDCSMYWLTAWLANTSTSLRHQ 582
                                          .|.:|.|..|.:.|.|.:.|...|...|:.|:..|
  Rat   171 ------------------------------SLSHLQINHNPFDCTCGIVWFKTWALATAVSIPEQ 205

  Fly   583 MPQAQNHSNGSTNQTPLDSYESIDHQIDALKC--QYGYRGDMLRVLSKLNCSVPTVVQFSEPKMH 645
                                       |.:.|  .:..:|..|..|..|.||.|:|....:|...
  Rat   206 ---------------------------DNIACTSPHVLKGTPLSRLPPLPCSAPSVQLSYQPSQD 243

  Fly   646 K-------LLSTAKLECQISGSPVPDIIW--VTPRN--KILRHHADPDKRPIIIDSKEDAHQPPS 699
            .       :|:   |.|.:.|.|||.:.|  .||..  :|...:...|.||:           |.
  Rat   244 GAELRPGFVLA---LHCDVDGQPVPQLHWHIHTPGGTVEIASPNVGTDGRPL-----------PG 294

  Fly   700 AQELAALMDESYIQSLNWTRQNSLVGR-RVVLVENGSLLVHNISRIDSGLYTCYAFNVMGKASAG 763
            |  |||                  .|: |.....|||||:.:..:::.|.|:|.|.|.:|.|.:.
  Rat   295 A--LAA------------------SGQPRFQAFANGSLLIPDFGKLEEGTYSCLATNELGSAESS 339

  Fly   764 LRL 766
            :.:
  Rat   340 VNV 342

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.