DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16974 and Tl

DIOPT Version :9

Sequence 1:NP_001246018.1 Gene:CG16974 / 34713 FlyBaseID:FBgn0032479 Length:1257 Species:Drosophila melanogaster
Sequence 2:NP_001262995.1 Gene:Tl / 43222 FlyBaseID:FBgn0262473 Length:1117 Species:Drosophila melanogaster


Alignment Length:1175 Identity:243/1175 - (20%)
Similarity:382/1175 - (32%) Gaps:442/1175 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 LPSVGHVDPTGNVFK-------LNCEHVD----LRRVNQELLSQRSSHINYNQLM----LAHVPA 162
            |..:|.|.||..:|:       :..:|:|    |:|.  ...::|.:||..|.|.    |:|:..
  Fly   119 LDYLGIVSPTTLIFESDNLGMNITRQHLDRLHGLKRF--RFTTRRLTHIPANLLTDMRNLSHLEL 181

  Fly   163 DRSNPLKLP-----QLESLREFSWQSSELKDETLMELFTRQPRSFEYMERLNLAENRLECLHWAI 222
             |:|..::|     .||:|....:.|::|: :....:|.:.|:    :::|||..|:|..|....
  Fly   182 -RANIEEMPSHLFDDLENLESIEFGSNKLR-QMPRGIFGKMPK----LKQLNLWSNQLHNLTKHD 240

  Fly   223 PLAVRRVKVLEMSGN-----------RLSNCSLLNL-------------QYMKQLQELHL--DRS 261
            ......|..:::..|           .|:|.:.:||             .:.|.|.|:.|  :|.
  Fly   241 FEGATSVLGIDIHDNGIEQLPHDVFAHLTNVTDINLSANLFRSLPQGLFDHNKHLNEVRLMNNRV 305

  Fly   262 ELTYLPQRFLGELSELRMLNLSQNLLTELPRDIFVGALKLERLYLSGNRLSVLPFMLFQTAADLQ 326
            .|..||.|......||::|.|... |..||.|:|..:.::..:.|..|.|..||..|.:...:|.
  Fly   306 PLATLPSRLFANQPELQILRLRAE-LQSLPGDLFEHSTQITNISLGDNLLKTLPATLLEHQVNLL 369

  Fly   327 VLDLSDNRLLSFPDNFFARNGQLRQLHLQRNQLKSIGKHSLYSLRELRQLDLSQNSLSVIDRKAF 391
            .||||:|||...||:.||....|..|.|:.|.|..|......:|..|..|.:|:|.|..||.:||
  Fly   370 SLDLSNNRLTHLPDSLFAHTTNLTDLRLEDNLLTGISGDIFSNLGNLVTLVMSRNRLRTIDSRAF 434

  Fly   392 ES--------LDH---------------------------LLALNVSGNNLTLLSSIIFQSLHAL 421
            .|        |||                           ||.||:..|::..:.:....::..|
  Fly   435 VSTNGLRHLHLDHNDIDLQQPLLDIMLQTQINSPFGYMHGLLTLNLRNNSIIFVYNDWKNTMLQL 499

  Fly   422 RQLDLSRNQ-------------------------------------------------------- 430
            |:||||.|.                                                        
  Fly   500 RELDLSYNNISSLGYEDLAFLSQNRLHVNMTHNKIRRIALPEDVHLGEGYNNNLVHVDLNDNPLV 564

  Fly   431 -------FKQLPSGLFQRQRSLVL-LRIDE-----------TPIEQ-----------FSN----- 460
                   |.||..|:.:.|.|... ||.|.           ||:.|           ||:     
  Fly   565 CDCTILWFIQLVRGVHKPQYSRQFKLRTDRLVCSQPNVLEGTPVRQIEPQTLICPLDFSDDPRER 629

  Fly   461 --------WISRYDESLVDPQVLHRLRYLSVQQNRKLTYLPATLFANTPNIR------ELLLAEN 511
                    .:..||::||          ::.... .||::|     ..||:.      ||.|..|
  Fly   630 KCPRGCNCHVRTYDKALV----------INCHSG-NLTHVP-----RLPNLHKNMQLMELHLENN 678

  Fly   512 GLLQLPT-QISGLSRLQRLSVRGNSLGS-----LPENIKEL----RQLHYLN------------- 553
            .||:||: ...|...:..|.:.||:|.|     ||.|:..|    ..|..||             
  Fly   679 TLLRLPSANTPGYESVTSLHLAGNNLTSIDVDQLPTNLTHLDISWNHLQMLNATVLGFLNRTMKW 743

  Fly   554 ----ILGNEYQCDCSMYWLTAWLANTSTSLRHQMPQAQNHSNGSTNQTPL-----DSYESIDHQI 609
                :.||.:.|||:                               ..||     |::|.|    
  Fly   744 RSVKLSGNPWMCDCT-------------------------------AKPLLLFTQDNFERI---- 773

  Fly   610 DALKCQYGYRGDMLRVLSKLNCSVPT-VVQFS-------EPKMHKLLSTA--------------- 651
                   |.|.:|:.|    |..:|| :|:.|       |..:...|:..               
  Fly   774 -------GDRNEMMCV----NAEMPTRMVELSTNDICPAEKGVFIALAVVIALTGLLAGFTAALY 827

  Fly   652 -KLECQISGSPVPDIIWVTPRNKILRH--HADPDKRPIIIDSKEDAHQPPSAQELAALMDESYIQ 713
             |.:.:|.       ||:...|.:|..  ..|.||     |.|.||....|.:      |:|:|:
  Fly   828 YKFQTEIK-------IWLYAHNLLLWFVTEEDLDK-----DKKFDAFISYSHK------DQSFIE 874

  Fly   714 SLNWTRQNSLVGRRVVLVENG----SLLVHNISRIDSGLYTCYAFNVMGKASAGLRLYIDPIVFY 774
            ..           .|..:|:|    .|.||....:..|   ....|:|...:...|         
  Fly   875 DY-----------LVPQLEHGPQKFQLCVHERDWLVGG---HIPENIMRSVADSRR--------- 916

  Fly   775 RVKIGSILFGTALATAFLLLTLIVQGLRSCLSRWGICNRFYCCVNRKKKSPRKHQ----IYAMLD 835
                                |:||.......|.|....  :...:|...:..:.:    ||:.:.
  Fly   917 --------------------TIIVLSQNFIKSEWARLE--FRAAHRSALNEGRSRIIVIIYSDIG 959

  Fly   836 SIETYKSQQLERLRENYTQQVHRIRENCAQQVEWIQSSYTSQAK----HIREFRDIGSNHL--TT 894
            .:|....:....|:.|             ..::|....:..:.:    |.|...:||:..|  |.
  Fly   960 DVEKLDEELKAYLKMN-------------TYLKWGDPWFWDKLRFALPHRRPVGNIGNGALIKTA 1011

  Fly   895 LKDQYYDQVKKVR------DYSTGQLSWVRENYVFQRNKIRKFSAHQVLRLREGYKYQQQTLNKV 953
            ||....|:::.::      ..:|......:...|.|.|.:   :.||.:.:..|           
  Fly  1012 LKGSTDDKLELIKPSPVTPPLTTPPAEATKNPLVAQLNGV---TPHQAIMIANG----------- 1062

  Fly   954 LENLPSFYFENCRGRCEEDIAEDIDCYFKGQMDFGDSKELHIQKIKARLSANYSASKASLYYTPP 1018
            ...|.:.|..|  |:...:               |......|....|:.|......||.|:...|
  Fly  1063 KNGLTNLYTPN--GKSHGN---------------GHINGAFIINTNAKQSDVXDWEKAELFQFDP 1110

  Fly  1019 DDDLL 1023
            ||:||
  Fly  1111 DDELL 1115

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16974NP_001246018.1 leucine-rich repeat 206..228 CDD:275380 6/21 (29%)
leucine-rich repeat 229..252 CDD:275380 6/46 (13%)
LRR_RI <246..433 CDD:238064 71/299 (24%)
LRR_8 251..311 CDD:290566 20/61 (33%)
leucine-rich repeat 253..276 CDD:275380 8/24 (33%)
leucine-rich repeat 277..300 CDD:275380 8/22 (36%)
leucine-rich repeat 301..324 CDD:275380 6/22 (27%)
LRR_8 325..383 CDD:290566 23/57 (40%)
leucine-rich repeat 325..348 CDD:275380 12/22 (55%)
leucine-rich repeat 349..372 CDD:275380 7/22 (32%)
LRR_RI 351..>557 CDD:238064 75/372 (20%)
LRR_8 371..431 CDD:290566 25/157 (16%)
leucine-rich repeat 373..396 CDD:275380 11/30 (37%)
leucine-rich repeat 397..420 CDD:275380 5/22 (23%)
leucine-rich repeat 421..444 CDD:275380 12/85 (14%)
LRR_8 477..536 CDD:290566 17/65 (26%)
leucine-rich repeat 478..502 CDD:275380 3/23 (13%)
leucine-rich repeat 503..526 CDD:275380 9/29 (31%)
Ig <714..761 CDD:299845 9/50 (18%)
TlNP_001262995.1 LRR_8 174..233 CDD:290566 16/64 (25%)
leucine-rich repeat 176..198 CDD:275380 6/22 (27%)
leucine-rich repeat 199..222 CDD:275380 4/23 (17%)
LRR_RI 216..542 CDD:238064 82/330 (25%)
LRR_8 221..281 CDD:290566 13/63 (21%)
leucine-rich repeat 223..270 CDD:275380 9/46 (20%)
leucine-rich repeat 271..294 CDD:275380 2/22 (9%)
leucine-rich repeat 295..320 CDD:275380 8/24 (33%)
leucine-rich repeat 321..343 CDD:275380 8/22 (36%)
LRR_8 342..402 CDD:290566 22/59 (37%)
leucine-rich repeat 344..367 CDD:275380 6/22 (27%)
leucine-rich repeat 368..391 CDD:275380 12/22 (55%)
LRR_8 390..450 CDD:290566 20/59 (34%)
leucine-rich repeat 392..415 CDD:275380 7/22 (32%)
leucine-rich repeat 416..439 CDD:275380 10/22 (45%)
leucine-rich repeat 440..474 CDD:275380 3/33 (9%)
leucine-rich repeat 475..498 CDD:275380 5/22 (23%)
LRR_8 477..534 CDD:290566 10/56 (18%)
leucine-rich repeat 499..520 CDD:275380 7/20 (35%)
leucine-rich repeat 523..552 CDD:275380 0/28 (0%)
LRRCT 561..619 CDD:214507 12/57 (21%)
LRRNT 631..667 CDD:214470 9/51 (18%)
leucine-rich repeat 664..693 CDD:275380 9/28 (32%)
LRR_8 669..726 CDD:290566 18/56 (32%)
leucine-rich repeat 694..715 CDD:275380 7/20 (35%)
leucine-rich repeat 716..737 CDD:275380 4/20 (20%)
LRRCT 751..800 CDD:214507 18/94 (19%)
TIR 858..996 CDD:214587 29/201 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453812
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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