DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16974 and 18w

DIOPT Version :9

Sequence 1:NP_001246018.1 Gene:CG16974 / 34713 FlyBaseID:FBgn0032479 Length:1257 Species:Drosophila melanogaster
Sequence 2:NP_476814.1 Gene:18w / 37277 FlyBaseID:FBgn0004364 Length:1385 Species:Drosophila melanogaster


Alignment Length:1476 Identity:288/1476 - (19%)
Similarity:475/1476 - (32%) Gaps:603/1476 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 DSDEGLWLDAADAGSESVEVEEHELPSVGHVDPTGNVFKLNCEHVDLRRVNQELLS--------- 144
            :|..|..||        ::|.|    :.|.:|       |.|        :||||.         
  Fly    49 ESGTGTPLD--------LQVAE----AAGRLD-------LQC--------SQELLHASELAPGLF 86

  Fly   145 ---QRSSHINYNQLMLAHVPADRSNPLKLPQLESLREFSWQSSEL---KDETLMELFTRQPRSFE 203
               |:.|.:..:...|..||     |.....|.||:..:.:|...   ..:|| ||..:..:..:
  Fly    87 RQLQKLSELRIDACKLQRVP-----PNAFEGLMSLKRLTLESHNAVWGPGKTL-ELHGQSFQGLK 145

  Fly   204 YMERLNLAENRLECLHWAIPLAVRRVKVLEMSGNRLSNCSLLNL--------------------- 247
            .:..|:|.:|.:..|...:..::..:::|.::.||:.:...|..                     
  Fly   146 ELSELHLGDNNIRQLPEGVWCSMPSLQLLNLTQNRIRSAEFLGFSEKLCAGSALSNANGAVSGGS 210

  Fly   248 ---------------------QYMKQLQELHLDRSELTYLPQRFLGELSELRMLNLSQNLLTELP 291
                                 ..:::||.|.|..:.::.|....|..||.||:||:|.|.|..||
  Fly   211 ELQTLDVSFNELRSLPDAWGASRLRRLQTLSLQHNNISTLAPNALAGLSSLRVLNISYNHLVSLP 275

  Fly   292 RDIFVGALKLERLYLSGNRLSVLPFMLFQTAADLQVLDLSDNRLLS--FPDNFFARNGQLRQLHL 354
            .:.|.|..:|..|:|.||.|..||..|......|.|||||.|:|.|  ..::.||...:|..|:|
  Fly   276 SEAFAGNKELRELHLQGNDLYELPKGLLHRLEQLLVLDLSGNQLTSHHVDNSTFAGLIRLIVLNL 340

  Fly   355 QRNQLKSIGKHSLYSLRELRQLDLSQNSLSVIDRKAFESLDHLLALNVSGNNLTLLSSIIFQSLH 419
            ..|.|..||..:...|..|:.||:..||:..|:..||..|.:|..||::.|.|..|.:.||..|:
  Fly   341 SNNALTRIGSKTFKELYFLQILDMRNNSIGHIEEGAFLPLYNLHTLNLAENRLHTLDNRIFNGLY 405

  Fly   420 A------------------------LRQLDLSRNQFKQLPSGLFQRQRSLVLLRIDETPIEQFSN 460
            .                        |::||||.||..::|..: |....|..|.:.|..|.:|.|
  Fly   406 VLTKLTLNNNLVSIVESQAFRNCSDLKELDLSSNQLTEVPEAV-QDLSMLKTLDLGENQISEFKN 469

  Fly   461 WISRYDES-----LVDPQV----------LHRLRYLSVQQNR----------KLTYLPAT----- 495
            ...|....     |:|.::          |.||..|::.:||          |.|.:.|.     
  Fly   470 NTFRNLNQLTGLRLIDNRIGNITVGMFQDLPRLSVLNLAKNRIQSIERGAFDKNTEIEAIRLDKN 534

  Fly   496 -------LFANTPNIRELLLAENGLLQ-----LPTQISGLSRLQRLSVRGN---SLG-------- 537
                   :||...::..|.|:||.|:.     :|      |.|:.|.:.||   :||        
  Fly   535 FLTDINGIFATLASLLWLNLSENHLVWFDYAFIP------SNLKWLDIHGNYIEALGNYYKLQEE 593

  Fly   538 -------------------SLPENIKEL----------------------RQLHYLNIL------ 555
                               |:|.:|:.|                      |...|.|:|      
  Fly   594 IRVTTLDASHNRITEIGAMSVPNSIELLFINNNIIGQIQANTFVDKTRLARVDLYANVLSKISLN 658

  Fly   556 -------------------GNEYQCDCSMYWLTAWLANTSTSLRHQMPQAQNHSNGSTNQTPLDS 601
                               ||.::|||||.||                  |..:|.:|.|.|   
  Fly   659 ALRVAPVSAEKPVPEFYLGGNPFECDCSMEWL------------------QRINNLTTRQHP--- 702

  Fly   602 YESIDHQIDA--LKCQYGY-RGDMLRVLSKLNCS--VPTVVQFSEPKMHKLLSTAKLECQI---- 657
                 |.:|.  ::|...: |...||.|:.|:.|  |........|..| .....:.||::    
  Fly   703 -----HVVDLGNIECLMPHSRSAPLRPLASLSASDFVCKYESHCPPTCH-CCEYEQCECEVICPG 761

  Fly   658 SGSPVPDIIWVT-----PRNKILRHHADPDKRP-IIIDSKEDAHQPPSAQ--------ELAALMD 708
            :.|...|..|.|     .|..:.   |.|::.| .:.|...|.:..|..:        .|.||  
  Fly   762 NCSCFHDATWATNIVDCGRQDLA---ALPNRIPQDVSDLYLDGNNMPELEVGHLTGRRNLRAL-- 821

  Fly   709 ESYIQSLN-WTRQN----SLVGRRVVLVENG-----------------SLLVHN----------- 740
              |:.:.| .|.||    .||..||:.:||.                 .|.:||           
  Fly   822 --YLNASNLMTLQNGSLAQLVNLRVLHLENNKLTALEGTEFRSLGLLRELYLHNNMLTHISNATF 884

  Fly   741 -------ISRIDSGLYTC-----YAFNVMGKA--------------------------------- 760
                   :.|:|:...:.     |..::.|..                                 
  Fly   885 EPLVSLEVLRLDNNRLSSLPHLQYRHSLQGLTLGRNAWSCRCQQLRELAQFVSDNAMVVRDAHDI 949

  Fly   761 ---SAGLRLYIDPIVFYRVKIGSI------------------------------LFGTALATAFL 792
               .||::..::       .||::                              |....|...||
  Fly   950 YCLDAGIKRELE-------LIGNLANGPDCSDLLDASASNISSSQDLAGGYRLPLLAAVLVLIFL 1007

  Fly   793 LLTLIV---------------QGLRSCLSRWG-------------------ICNR---------- 813
            ::.||:               .|:|.|..|:.                   :|..          
  Fly  1008 VVVLIIVFVFRESVRMWLFAHYGVRVCEPRFEDAGKLYDAIILHSEKDYEFVCRNIAAELEHGRP 1072

  Fly   814 -FYCCVNRKKKSPRKHQIYAMLDSIETYKSQQ------------LERLRENYTQQVHRIRENCAQ 865
             |..|:.::...|:.    :.|..:|..::.:            .|..|..:....|......||
  Fly  1073 PFRLCIQQRDLPPQA----SHLQLVEGARASRKIILVLTRNLLATEWNRIEFRNAFHESLRGLAQ 1133

  Fly   866 QVEWI-QSSYTSQAKHIRE----FRDIGSNHLTTLKDQYYDQVKKVRDYSTGQLSWVRENYVFQR 925
            ::..| ::|.:::|:.:.|    .:.:.||.|.|. |:|:  .:|:|.....:||....||....
  Fly  1134 KLVIIEETSVSAEAEDVAELSPYLKSVPSNRLLTC-DRYF--WEKLRYAIPIELSPRGNNYTLDH 1195

  Fly   926 NKIRKFSAHQVLRLRE----GYKYQQQTLNKVLENLPSFYFENCRGRCEEDIAEDIDCYFKGQMD 986
            ::          |.::    |..::|      ....|::|       |.|:              
  Fly  1196 HE----------RFKQPVSPGMIFRQ------APPPPAYY-------CTEE-------------- 1223

  Fly   987 FGDSKELHIQKIKARLSANYSASKAS--------------------LYYTPPDDDLLHSSQ---- 1027
                           :.||||::..:                    :...||.:.:.||.:    
  Fly  1224 ---------------MEANYSSATTATPSPRPTRPGGAARIVDSMPMPMRPPSEHIYHSIESEYS 1273

  Fly  1028 -------LNL---------QNSPIHINYIDENLDQQKQLEHDFKMEPQ---------LLLYNASM 1067
                   |::         |...:.::...:...||:.|:..|:..||         :.|.:.|.
  Fly  1274 AYDQHEALSMIPTGLMHQHQQQQLRLHQQQQQQQQQRLLQPQFRAMPQQAIPAPSAPVHLRSGSG 1338

  Fly  1068 LYMNPEGASSSGQAAALAAAGALSQFISVEDNNQEQEMQPLRKISG 1113
            |........|:.||:..|||.            |:|:.|..::.:|
  Fly  1339 LSQASTSTQSTAQASTSAAAA------------QQQQQQQQQQAAG 1372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16974NP_001246018.1 leucine-rich repeat 206..228 CDD:275380 4/21 (19%)
leucine-rich repeat 229..252 CDD:275380 4/64 (6%)
LRR_RI <246..433 CDD:238064 72/254 (28%)
LRR_8 251..311 CDD:290566 24/59 (41%)
leucine-rich repeat 253..276 CDD:275380 7/22 (32%)
leucine-rich repeat 277..300 CDD:275380 11/22 (50%)
leucine-rich repeat 301..324 CDD:275380 9/22 (41%)
LRR_8 325..383 CDD:290566 23/59 (39%)
leucine-rich repeat 325..348 CDD:275380 11/24 (46%)
leucine-rich repeat 349..372 CDD:275380 8/22 (36%)
LRR_RI 351..>557 CDD:238064 75/348 (22%)
LRR_8 371..431 CDD:290566 24/83 (29%)
leucine-rich repeat 373..396 CDD:275380 9/22 (41%)
leucine-rich repeat 397..420 CDD:275380 9/22 (41%)
leucine-rich repeat 421..444 CDD:275380 9/22 (41%)
LRR_8 477..536 CDD:290566 21/88 (24%)
leucine-rich repeat 478..502 CDD:275380 9/45 (20%)
leucine-rich repeat 503..526 CDD:275380 7/27 (26%)
Ig <714..761 CDD:299845 17/127 (13%)
18wNP_476814.1 leucine-rich repeat 66..91 CDD:275380 7/39 (18%)
leucine-rich repeat 92..115 CDD:275380 6/27 (22%)
LRR_8 115..181 CDD:290566 13/66 (20%)
leucine-rich repeat 116..146 CDD:275380 6/30 (20%)
leucine-rich repeat 147..170 CDD:275380 4/22 (18%)
leucine-rich repeat 171..201 CDD:275380 4/29 (14%)
LRR_RI 210..464 CDD:238064 77/254 (30%)
leucine-rich repeat 212..236 CDD:275380 0/23 (0%)
LRR_8 235..295 CDD:290566 24/59 (41%)
leucine-rich repeat 237..260 CDD:275380 7/22 (32%)
leucine-rich repeat 261..284 CDD:275380 11/22 (50%)
LRR_8 283..345 CDD:290566 24/61 (39%)
leucine-rich repeat 285..308 CDD:275380 9/22 (41%)
leucine-rich repeat 309..334 CDD:275380 11/24 (46%)
LRR_8 334..393 CDD:290566 21/58 (36%)
leucine-rich repeat 335..358 CDD:275380 8/22 (36%)
leucine-rich repeat 359..382 CDD:275380 9/22 (41%)
LRR_8 382..441 CDD:290566 15/58 (26%)
leucine-rich repeat 383..406 CDD:275380 9/22 (41%)
leucine-rich repeat 407..430 CDD:275380 0/22 (0%)
LRR_8 431..488 CDD:290566 18/57 (32%)
leucine-rich repeat 431..451 CDD:275380 9/20 (45%)
leucine-rich repeat 454..477 CDD:275380 7/22 (32%)
LRR_8 477..559 CDD:290566 17/81 (21%)
leucine-rich repeat 478..499 CDD:275380 2/20 (10%)
leucine-rich repeat 502..525 CDD:275380 5/22 (23%)
leucine-rich repeat 526..548 CDD:275380 3/21 (14%)
leucine-rich repeat 590..617 CDD:275380 2/26 (8%)
leucine-rich repeat 618..641 CDD:275380 2/22 (9%)
leucine-rich repeat 642..689 CDD:275380 11/46 (24%)
LRRCT 679..736 CDD:214507 23/82 (28%)
leucine-rich repeat 775..796 CDD:275380 4/23 (17%)
LRR_8 797..852 CDD:290566 16/58 (28%)
leucine-rich repeat 797..817 CDD:275380 2/19 (11%)
leucine-rich repeat 818..841 CDD:275380 9/26 (35%)
LRR_8 841..900 CDD:290566 9/58 (16%)
leucine-rich repeat 842..865 CDD:275380 4/22 (18%)
LRR_4 866..907 CDD:289563 5/40 (13%)
leucine-rich repeat 866..889 CDD:275380 3/22 (14%)
leucine-rich repeat 890..911 CDD:275380 3/20 (15%)
TIR 1045..1183 CDD:214587 23/144 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453753
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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