Sequence 1: | NP_001246018.1 | Gene: | CG16974 / 34713 | FlyBaseID: | FBgn0032479 | Length: | 1257 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_611247.3 | Gene: | swi2 / 37010 | FlyBaseID: | FBgn0034262 | Length: | 499 | Species: | Drosophila melanogaster |
Alignment Length: | 515 | Identity: | 104/515 - (20%) |
---|---|---|---|
Similarity: | 174/515 - (33%) | Gaps: | 152/515 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 206 ERLNLAENRLECLHWAIPLAVRRVKVLEMSGNRLSNCS-------------LLNLQYMKQLQELH 257
Fly 258 LDRSELTYL----PQ------RFLGELSELRMLNLSQNLLTELPRDIFVGALKLERLYLSGNRLS 312
Fly 313 VLPFMLFQTAADLQVLDLSDNRL------LSFPDNFFARNGQLRQLHLQRNQLKSIGKHSLYSLR 371
Fly 372 -ELRQLDLSQNSLSVIDRKAFESLDHLLALNV------------SGNNLTLLSSIIFQSLH-ALR 422
Fly 423 QLDLSRNQFKQLPSGLFQRQRSLVLLRIDETPIEQFSNWISRYDESLVDPQVLHRLRYLSVQQNR 487
Fly 488 KLTYLPATLFANTPNIRELLLAENGLLQLPTQISGLSRLQRLSVRGNSLG-----SLPENIKELR 547
Fly 548 QLHYLNILGNEYQCDCSMYWLTAWLANTSTSLRHQMPQAQNHSNGSTNQTPLDSYESIDHQIDAL 612
Fly 613 KCQYGYRGDMLRVLSKLNCSVPTVVQFSEPKMHKLLSTAKLE-CQIS---GSPVPDIIWV 668 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG16974 | NP_001246018.1 | leucine-rich repeat | 206..228 | CDD:275380 | 3/21 (14%) |
leucine-rich repeat | 229..252 | CDD:275380 | 7/35 (20%) | ||
LRR_RI | <246..433 | CDD:238064 | 55/216 (25%) | ||
LRR_8 | 251..311 | CDD:290566 | 18/69 (26%) | ||
leucine-rich repeat | 253..276 | CDD:275380 | 7/32 (22%) | ||
leucine-rich repeat | 277..300 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 301..324 | CDD:275380 | 5/22 (23%) | ||
LRR_8 | 325..383 | CDD:290566 | 18/64 (28%) | ||
leucine-rich repeat | 325..348 | CDD:275380 | 11/28 (39%) | ||
leucine-rich repeat | 349..372 | CDD:275380 | 5/23 (22%) | ||
LRR_RI | 351..>557 | CDD:238064 | 42/224 (19%) | ||
LRR_8 | 371..431 | CDD:290566 | 14/73 (19%) | ||
leucine-rich repeat | 373..396 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 397..420 | CDD:275380 | 6/35 (17%) | ||
leucine-rich repeat | 421..444 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 477..536 | CDD:290566 | 8/58 (14%) | ||
leucine-rich repeat | 478..502 | CDD:275380 | 2/23 (9%) | ||
leucine-rich repeat | 503..526 | CDD:275380 | 1/22 (5%) | ||
Ig | <714..761 | CDD:299845 | |||
swi2 | NP_611247.3 | LRR | <117..384 | CDD:227223 | 68/309 (22%) |
leucine-rich repeat | 132..154 | CDD:275378 | 7/22 (32%) | ||
leucine-rich repeat | 155..178 | CDD:275378 | 5/22 (23%) | ||
leucine-rich repeat | 179..201 | CDD:275378 | 9/21 (43%) | ||
leucine-rich repeat | 202..214 | CDD:275378 | 5/18 (28%) | ||
leucine-rich repeat | 287..307 | CDD:275378 | 7/19 (37%) | ||
leucine-rich repeat | 308..332 | CDD:275378 | 6/33 (18%) | ||
leucine-rich repeat | 333..357 | CDD:275378 | 3/33 (9%) | ||
leucine-rich repeat | 358..385 | CDD:275378 | 6/26 (23%) | ||
leucine-rich repeat | 386..398 | CDD:275378 | 2/11 (18%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR24366 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |