DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG16974 and CG18480

DIOPT Version :9

Sequence 1:NP_001246018.1 Gene:CG16974 / 34713 FlyBaseID:FBgn0032479 Length:1257 Species:Drosophila melanogaster
Sequence 2:NP_001285960.1 Gene:CG18480 / 34920 FlyBaseID:FBgn0028518 Length:550 Species:Drosophila melanogaster


Alignment Length:572 Identity:131/572 - (22%)
Similarity:215/572 - (37%) Gaps:158/572 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   352 LHLQRNQLKSIGKHSLYSLREL----RQLDLSQNSLSVIDRKAFESLDHLLALNVSGNNLTLLSS 412
            ||.|||:.....|..:.:..|:    ..||||.|.::.||..:|::..|||.|.::.|.:..|..
  Fly    51 LHAQRNRAVCSAKRLISANIEIPTTVELLDLSYNDITTIDDDSFKTTIHLLNLTLAHNAIHTLYG 115

  Fly   413 IIFQSLHALRQLDLSRNQFKQLPSGLFQRQRSLVLLRIDETPIEQFSNWISRYDESLVDPQVLHR 477
            ..|..|..||.||||.|:.:|                |||..:|  ||               ::
  Fly   116 DAFVELTRLRYLDLSYNRLEQ----------------IDEHILE--SN---------------NQ 147

  Fly   478 LRYLSVQQNRKLTYLPATLFANTPNIRELLLAENGLLQLPTQ-ISGLSRLQRLSVRGNSLGSL-P 540
            |.:|:::.| ||:.|.......:|::|.|.|..:.:.||.|| :|.|.:|::|.:..|.|.:| |
  Fly   148 LIHLNLEGN-KLSTLGKGPILRSPSLRSLNLRNSQVNQLGTQLLSALPQLRQLDLAQNLLLTLSP 211

  Fly   541 ENIKELRQLHYLNILGNEYQCDCSMYWLTAWLANTSTSLRHQMPQAQNHSNGSTNQTPLDSYESI 605
            .:....|.|..||:..|.:.||.:       ||..:|.|| |...|...||....:..       
  Fly   212 GDFHAPRNLASLNVEENPFNCDRA-------LAKVATGLR-QRGVAIFMSNCMEEEVQ------- 261

  Fly   606 DHQIDALKCQYGYRGDMLRVLSKLNCSVPTVVQFSEPKMHKLLSTAKLECQISGSPVPDIIWVTP 670
            |||.||                       ..|.|.. |..|..|...||....|......:|   
  Fly   262 DHQDDA-----------------------EAVNFPN-KNEKFESMEYLEPSTRGPQSVLSVW--- 299

  Fly   671 RNKILRHHADPDKRPIIIDSKEDAHQPPSAQELAALMDESYIQSLNWTRQNSLVGRRVVLVE-NG 734
            |:               :||.|:.:.....:::::|.|     ....:|:...:..|:.|.. :.
  Fly   300 RD---------------LDSSEEQNSSQDDEQMSSLSD-----VCEGSREKLCLRYRICLERVSH 344

  Fly   735 SLLVHNISRIDSGLYTCYAFNVMGKASAGLRLYIDPIVFYRVKIGSILFG-TALATAFLLLTLIV 798
            .||....|:::..:...:.::.            |.:     |:..::.| |.:.....::|..:
  Fly   345 ELLAGGNSQLEDEIIRTHTYDE------------DDL-----KLAFVVGGATGVCMVIFIITFAL 392

  Fly   799 QGLRSCLSRWGICNRFYCCVNRKKKS-------------PRKHQIYAMLDSIETYKSQQLERLRE 850
                 ||..        ||..|||||             |.:..    |.:|.|:..|:....|.
  Fly   393 -----CLKS--------CCEMRKKKSNPEVATGVSAPLNPSQDS----LPTIHTWSPQRTRNPRR 440

  Fly   851 NYTQ-----QVHR-IRENCAQQVEWIQSSYTSQAKHIREFRDIGSNHLTTLK 896
            :..|     |.|. :|:....|..::...:...|:. :.:|.|..|..|.::
  Fly   441 SNPQRPRSTQSHAVVRQPYGPQDNFVSRLFGRPARS-QYYRTINQNTATLIR 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16974NP_001246018.1 leucine-rich repeat 206..228 CDD:275380
leucine-rich repeat 229..252 CDD:275380
LRR_RI <246..433 CDD:238064 30/84 (36%)
LRR_8 251..311 CDD:290566
leucine-rich repeat 253..276 CDD:275380
leucine-rich repeat 277..300 CDD:275380
leucine-rich repeat 301..324 CDD:275380
LRR_8 325..383 CDD:290566 12/34 (35%)
leucine-rich repeat 325..348 CDD:275380
leucine-rich repeat 349..372 CDD:275380 6/19 (32%)
LRR_RI 351..>557 CDD:238064 63/210 (30%)
LRR_8 371..431 CDD:290566 24/63 (38%)
leucine-rich repeat 373..396 CDD:275380 8/26 (31%)
leucine-rich repeat 397..420 CDD:275380 7/22 (32%)
leucine-rich repeat 421..444 CDD:275380 8/22 (36%)
LRR_8 477..536 CDD:290566 19/59 (32%)
leucine-rich repeat 478..502 CDD:275380 6/23 (26%)
leucine-rich repeat 503..526 CDD:275380 9/23 (39%)
Ig <714..761 CDD:299845 6/47 (13%)
CG18480NP_001285960.1 LRR_8 74..134 CDD:290566 23/59 (39%)
LRR_RI <76..230 CDD:238064 57/187 (30%)
leucine-rich repeat 76..99 CDD:275380 8/22 (36%)
leucine-rich repeat 100..123 CDD:275380 7/22 (32%)
LRR_8 122..182 CDD:290566 24/93 (26%)
leucine-rich repeat 124..147 CDD:275380 14/55 (25%)
leucine-rich repeat 148..171 CDD:275380 6/23 (26%)
LRR_8 170..230 CDD:290566 21/59 (36%)
leucine-rich repeat 172..195 CDD:275380 9/22 (41%)
leucine-rich repeat 196..219 CDD:275380 6/22 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453754
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24366
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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