DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16974 and kek3

DIOPT Version :9

Sequence 1:NP_001246018.1 Gene:CG16974 / 34713 FlyBaseID:FBgn0032479 Length:1257 Species:Drosophila melanogaster
Sequence 2:NP_001162986.1 Gene:kek3 / 34912 FlyBaseID:FBgn0028370 Length:1021 Species:Drosophila melanogaster


Alignment Length:998 Identity:199/998 - (19%)
Similarity:310/998 - (31%) Gaps:385/998 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   323 ADLQVLDLSDNRLLSFPDNFFARNG--QLRQLHLQRNQLKSIGKHSLYSLRELRQLDLSQNSLSV 385
            |..|:||||.|.:...||:.||...  .|::::|.|..|:.|.:|:...|..|.:||||||.||.
  Fly   110 AGTQLLDLSGNEIQLIPDDSFATAQLLNLQKVYLARCHLRLIERHAFRKLINLVELDLSQNLLSA 174

  Fly   386 IDRKAFESLDHLLALNVSGNNLTLLSSIIFQSLHALRQLDLSRNQFKQLPSGLFQRQRSLVLLRI 450
            |                        .|:....:..||:|.||.|...::|...|.....||.|.:
  Fly   175 I------------------------PSLALYHVSELRELRLSGNPILRVPDDAFGHVPQLVKLEL 215

  Fly   451 DETPIEQFSNWISRYDESLVDPQVLHRLRYLSVQQNRKLTYLPATLFANTPNIRELLLAENGLLQ 515
            .:.                       ||.:::|:                               
  Fly   216 SDC-----------------------RLSHIAVR------------------------------- 226

  Fly   516 LPTQISGL-SRLQRLSVRGNSLGSLPE-NIKELRQLHYLNILGNEYQCDCSMYWLTAWLANTSTS 578
               ..:|| |.|:.|.:.||.|..:.. .|..|..||.|.:..|.:.|.||:..|.||:      
  Fly   227 ---AFAGLESSLEWLKLDGNRLSEVRSGTITSLASLHGLELARNTWNCSCSLRPLRAWM------ 282

  Fly   579 LRHQMPQAQNHSNGSTNQTPLDSYESIDHQIDALKCQYGYRGDMLRVLSKLNCSVPTVVQFSEPK 643
            |:..:|.....:..|..:....:::.:|  :|...|                  ||.:|. ::..
  Fly   283 LQQNIPSGIPPTCESPPRLSGRAWDKLD--VDDFAC------------------VPQIVA-TDTT 326

  Fly   644 MHKLLS-TAKLECQISGSPVPDIIWVTPRNKILRHHADPDKRPIIIDSKEDAHQPPSAQELAALM 707
            .|.:.. ...:.|.:.|.|.|.:.|:.....|....|..|.     ||..:.....:.|      
  Fly   327 AHGVEGRNITMSCYVEGVPQPAVKWLLKNRLIANLSAGGDG-----DSDSEPRTAAATQ------ 380

  Fly   708 DESYIQSLNWTRQNSLVGRRVVLVENGSLLVHNISRI--------DSGLYTCYAFNVMGKASAGL 764
                             ||:..:|.    ::.|.|.:        |:|:|||.|.|..||..|.:
  Fly   381 -----------------GRKTYVVN----MLRNASNLTILTADMQDAGIYTCAAENKAGKVEASV 424

  Fly   765 RLYID---PIVFYRVKIGSILFGTALATAFLLLTLIVQGLRSCLSRWGICNRFYCCVNRKKKSPR 826
            .|.:.   |...:.|:|  ||.|   |.|.|||   |.|    .|...||   .|.:.|      
  Fly   425 TLAVSRRPPEAPWGVRI--ILLG---AVAALLL---VGG----SSFAAIC---LCSLQR------ 468

  Fly   827 KHQIYAMLDSIETYKSQQLERLRENYTQQVHRIRENCAQQVEWIQSSYTSQAKHIREFRDIGSNH 891
                                                                             
  Fly   469 ----------------------------------------------------------------- 468

  Fly   892 LTTLKDQYYDQVKKVRDYSTGQLSWVRENYVFQRNKIRKFSAHQVLRLREGYKYQQQTLNKVLEN 956
                                             |.|:|.:::...:|..|.|:..:.|       
  Fly   469 ---------------------------------RRKLRLWNSVPPVRRSESYEKIEMT------- 493

  Fly   957 LPSFYFENCRGRCEEDIAEDIDC---YFKGQMDFGDSKEL-HIQKIKARLSANYSASKASLYYTP 1017
                      .|...|:.....|   ...|...|.|::|. :::.....|:.| .|.:|:....|
  Fly   494 ----------ARTRPDLGGGASCGGGSATGAGLFHDAEEQGYLRAAHTPLNDN-DAGQAAAIVNP 547

  Fly  1018 P-------DDDLLHSSQLNLQNSPIHINYIDENLDQQKQLEHDFKMEPQLLLYNASMLYMNPEGA 1075
            .       :.|.||.|        .|.:  ||..||  ||.|..:.:|      ||..:.:|...
  Fly   548 SAGSAQRRNGDYLHVS--------THCD--DEEEDQ--QLHHHPQQQP------ASQHHPHPNQQ 594

  Fly  1076 S----SSGQAAALAAAGALSQFISVEDNNQEQEMQPLRKISGKPLGMPELKDLNDVKTSKSCPAI 1136
            .    ...|...::|:||         ||.    .||.:..   |.:|.|.|:....::.|    
  Fly   595 QHQQRKGSQGHVVSASGA---------NNS----APLEETD---LHIPRLIDIGGTDSASS---- 639

  Fly  1137 YKVSKQRDGSTLHELQKEGEAPYQMLRINPVETTSLTSTVA-PVMQARTEKLNI----------- 1189
             .:|.|.|.:.    :..|.|.:.. :..|:.||.:.|..: ||..|....||.           
  Fly   640 -SISSQVDAAA----RLAGYAGHTW-KTTPIATTKINSPHSKPVTSAAPSSLNTQATPYAHYGNH 698

  Fly  1190 ILDECGTASLCKAEQEGDAGNSETP-------------PSESSCESNSLAASC--GDVC------ 1233
            ..||..|:..|...||.|..:|..|             ..|...:..:.|.:.  |.:|      
  Fly   699 PADEMATSVFCSEGQESDLFDSNYPDLLDIAKYAVAQAQQEGRGQGYAQATTTPNGGLCTLPRKL 763

  Fly  1234 QVSSKLANDASLPSTPPKPDHAS 1256
            :.|.|...::|...:|...|::|
  Fly   764 KTSGKYFRNSSDSQSPLLADNSS 786

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG16974NP_001246018.1 leucine-rich repeat 206..228 CDD:275380
leucine-rich repeat 229..252 CDD:275380
LRR_RI <246..433 CDD:238064 35/111 (32%)
LRR_8 251..311 CDD:290566
leucine-rich repeat 253..276 CDD:275380
leucine-rich repeat 277..300 CDD:275380