Sequence 1: | NP_001246018.1 | Gene: | CG16974 / 34713 | FlyBaseID: | FBgn0032479 | Length: | 1257 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001159471.1 | Gene: | Lingo2 / 242384 | MGIID: | 2442298 | Length: | 606 | Species: | Mus musculus |
Alignment Length: | 666 | Identity: | 153/666 - (22%) |
---|---|---|---|
Similarity: | 243/666 - (36%) | Gaps: | 163/666 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 211 AENRLECLH----WAIPLAVR-RVKVLEMSGNRLSNCSLLNLQYMKQLQELHLDRSELTYLPQRF 270
Fly 271 LGELSELRMLNLSQNLLTELPRDIFVGALKLERLYLSGNRLSVLPFMLFQTAADLQVLDLSDNRL 335
Fly 336 LSFPDNFFARNGQLRQLHLQRNQLKSIGKHSLYSLRELRQLDLSQNSLSVIDRKAFESLDHLLAL 400
Fly 401 NVSGNNLTLLSSIIFQSLHALRQLDLSRNQFKQL-PS----GLFQRQRSLVLLRIDETPIEQFSN 460
Fly 461 WISRYDESLVDPQVLHRLRYLSVQQNRKLTYLPATLFANTPNIRELLLAENGLLQL-PTQISGLS 524
Fly 525 RLQRLSVRGNSLGSLPENI-KELRQLHYLNILGNEYQCDCSMYWLTAWLANTSTSLRHQM---PQ 585
Fly 586 A-QNHSNGSTNQTPLDSYESIDHQIDALKCQYGYRGDMLRVLSKLNCSVPTVVQFSEPKMHKLL- 648
Fly 649 ---STAKLECQISGSPVPDIIWVTPRNKILRHHADPDKRPIIIDSKEDAHQPPSAQELAALMDES 710
Fly 711 YIQSLNWTRQNSLVGRRVVLVENGSLLVHNISRIDSGLYTCYAFNVMGK----ASAGLR------ 765
Fly 766 -LYIDPIVFYRVKIGSILFGTALATAFL--LLTLIVQGLRSCLSRWGICNRFYCCV--------- 818
Fly 819 NRKKKS------PRKH 828 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG16974 | NP_001246018.1 | leucine-rich repeat | 206..228 | CDD:275380 | 6/21 (29%) |
leucine-rich repeat | 229..252 | CDD:275380 | 6/22 (27%) | ||
LRR_RI | <246..433 | CDD:238064 | 44/186 (24%) | ||
LRR_8 | 251..311 | CDD:290566 | 12/59 (20%) | ||
leucine-rich repeat | 253..276 | CDD:275380 | 2/22 (9%) | ||
leucine-rich repeat | 277..300 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 301..324 | CDD:275380 | 9/22 (41%) | ||
LRR_8 | 325..383 | CDD:290566 | 17/57 (30%) | ||
leucine-rich repeat | 325..348 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 349..372 | CDD:275380 | 6/22 (27%) | ||
LRR_RI | 351..>557 | CDD:238064 | 51/212 (24%) | ||
LRR_8 | 371..431 | CDD:290566 | 15/59 (25%) | ||
leucine-rich repeat | 373..396 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 397..420 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 421..444 | CDD:275380 | 6/27 (22%) | ||
LRR_8 | 477..536 | CDD:290566 | 15/59 (25%) | ||
leucine-rich repeat | 478..502 | CDD:275380 | 5/23 (22%) | ||
leucine-rich repeat | 503..526 | CDD:275380 | 6/23 (26%) | ||
Ig | <714..761 | CDD:299845 | 16/50 (32%) | ||
Lingo2 | NP_001159471.1 | LRRNT | 27..60 | CDD:214470 | 6/23 (26%) |
leucine-rich repeat | 39..57 | CDD:275380 | 4/17 (24%) | ||
LRR 1 | 58..79 | 8/44 (18%) | |||
leucine-rich repeat | 59..82 | CDD:275380 | 8/46 (17%) | ||
LRR_8 | 60..117 | CDD:404697 | 18/80 (23%) | ||
LRR 2 | 82..103 | 5/20 (25%) | |||
leucine-rich repeat | 83..106 | CDD:275380 | 5/22 (23%) | ||
LRR_8 | 106..165 | CDD:404697 | 19/58 (33%) | ||
LRR 3 | 106..127 | 9/20 (45%) | |||
leucine-rich repeat | 107..130 | CDD:275380 | 9/22 (41%) | ||
LRR 4 | 130..151 | 7/20 (35%) | |||
leucine-rich repeat | 131..154 | CDD:275380 | 7/22 (32%) | ||
LRR 5 | 154..175 | 5/20 (25%) | |||
leucine-rich repeat | 155..178 | CDD:275380 | 6/22 (27%) | ||
PPP1R42 | 176..>373 | CDD:411060 | 53/211 (25%) | ||
LRR 6 | 178..199 | 6/20 (30%) | |||
leucine-rich repeat | 179..202 | CDD:275380 | 7/22 (32%) | ||
LRR 7 | 202..223 | 5/20 (25%) | |||
leucine-rich repeat | 203..250 | CDD:275380 | 11/46 (24%) | ||
LRR 8 | 226..247 | 4/20 (20%) | |||
LRR 9 | 250..271 | 3/20 (15%) | |||
leucine-rich repeat | 251..274 | CDD:275380 | 4/36 (11%) | ||
LRR 10 | 274..295 | 5/21 (24%) | |||
leucine-rich repeat | 275..298 | CDD:275380 | 5/23 (22%) | ||
LRR 11 | 298..319 | 4/20 (20%) | |||
leucine-rich repeat | 299..322 | CDD:275380 | 6/22 (27%) | ||
LRR 12 | 322..343 | 8/20 (40%) | |||
leucine-rich repeat | 323..343 | CDD:275380 | 8/19 (42%) | ||
LRRCT | 355..408 | CDD:214507 | 13/78 (17%) | ||
Ig | 411..500 | CDD:416386 | 35/136 (26%) | ||
Ig strand A' | 417..421 | CDD:409353 | 0/3 (0%) | ||
Ig strand B | 427..436 | CDD:409353 | 4/8 (50%) | ||
Ig strand C | 441..446 | CDD:409353 | 2/4 (50%) | ||
Ig strand C' | 449..451 | CDD:409353 | 0/1 (0%) | ||
Ig strand D | 460..463 | CDD:409353 | 0/2 (0%) | ||
Ig strand E | 466..473 | CDD:409353 | 2/6 (33%) | ||
Ig strand F | 479..487 | CDD:409353 | 4/7 (57%) | ||
Ig strand G | 490..500 | CDD:409353 | 3/9 (33%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D195414at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |