Sequence 1: | NP_001246018.1 | Gene: | CG16974 / 34713 | FlyBaseID: | FBgn0032479 | Length: | 1257 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006511149.1 | Gene: | Lingo1 / 235402 | MGIID: | 1915522 | Length: | 647 | Species: | Mus musculus |
Alignment Length: | 717 | Identity: | 164/717 - (22%) |
---|---|---|---|
Similarity: | 252/717 - (35%) | Gaps: | 176/717 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 181 WQSSELKDETLMELFTRQPRSF---EYMERL------NLAENRLECLHWAIPLAVRRVKVLEMSG 236
Fly 237 NRLS-----NCSLLNLQYMKQLQELHLDRSELTYLPQRFL----GELSELRMLNLSQNLLTELPR 292
Fly 293 DIFVGALKLERLYLSGNRLSVLPFMLFQTAADLQVLDLSDNRLLSFPDNFFARNGQLRQLHLQRN 357
Fly 358 QLKSIGKHSLYSLRELRQLDLSQNSLSVIDRKAFESLDHLLALNVSGNNLTLLSSIIFQSLHALR 422
Fly 423 QLDLSRNQFKQLPSGLFQRQRSLVLLRIDETPIEQFSNWISRYDESLVDPQVLH----RLRYLSV 483
Fly 484 QQNRKLTYLPATLFANTP-------NIRELLLAENGLLQL---------PTQISGLSRLQRLSVR 532
Fly 533 GNSLGSLPEN-IKELRQLHYLNILGNEYQCDCSMYWL--TAWLANTSTSLRHQMPQAQNHSNGST 594
Fly 595 NQTP--LDSYESIDHQIDAL-----KCQYGYRGDMLRVLSKLNCSVPTVVQFSEPKMHKLLSTAK 652
Fly 653 LECQISGSPVPDIIWVTPRNKILRHHADPDKRPIIIDSKEDAHQPPSAQELAALMDESYIQSLNW 717
Fly 718 TRQNSLVGRRVVLVENGSLLVHNISRIDSGLYTCYAFNVMGKASAGLRLYI------------DP 770
Fly 771 IVFYRVKIGSILFGTALATA---FLLLTLIVQGLRSCLSRWGICNRFYCCVN----RKKKSPRKH 828
Fly 829 QI 830 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG16974 | NP_001246018.1 | leucine-rich repeat | 206..228 | CDD:275380 | 5/27 (19%) |
leucine-rich repeat | 229..252 | CDD:275380 | 5/27 (19%) | ||
LRR_RI | <246..433 | CDD:238064 | 51/190 (27%) | ||
LRR_8 | 251..311 | CDD:290566 | 19/63 (30%) | ||
leucine-rich repeat | 253..276 | CDD:275380 | 6/26 (23%) | ||
leucine-rich repeat | 277..300 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 301..324 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 325..383 | CDD:290566 | 15/57 (26%) | ||
leucine-rich repeat | 325..348 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 349..372 | CDD:275380 | 4/22 (18%) | ||
LRR_RI | 351..>557 | CDD:238064 | 56/226 (25%) | ||
LRR_8 | 371..431 | CDD:290566 | 18/59 (31%) | ||
leucine-rich repeat | 373..396 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 397..420 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 421..444 | CDD:275380 | 5/22 (23%) | ||
LRR_8 | 477..536 | CDD:290566 | 21/74 (28%) | ||
leucine-rich repeat | 478..502 | CDD:275380 | 8/30 (27%) | ||
leucine-rich repeat | 503..526 | CDD:275380 | 8/31 (26%) | ||
Ig | <714..761 | CDD:299845 | 11/46 (24%) | ||
Lingo1 | XP_006511149.1 | LRRNT | 68..102 | CDD:214470 | 9/47 (19%) |
LRR | <93..398 | CDD:227223 | 82/309 (27%) | ||
leucine-rich repeat | 100..123 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 124..147 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 147..206 | CDD:338972 | 15/58 (26%) | ||
leucine-rich repeat | 148..171 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 172..219 | CDD:275380 | 12/46 (26%) | ||
leucine-rich repeat | 220..243 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 244..291 | CDD:275380 | 10/46 (22%) | ||
leucine-rich repeat | 292..315 | CDD:275380 | 7/25 (28%) | ||
leucine-rich repeat | 316..339 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 340..363 | CDD:275380 | 5/24 (21%) | ||
leucine-rich repeat | 364..384 | CDD:275380 | 8/19 (42%) | ||
PCC | 368..>448 | CDD:188093 | 24/93 (26%) | ||
Ig | 466..541 | CDD:386229 | 26/133 (20%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D195414at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |