DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rsph1 and AT1G21920

DIOPT Version :10

Sequence 1:NP_609609.1 Gene:Rsph1 / 34712 FlyBaseID:FBgn0032478 Length:344 Species:Drosophila melanogaster
Sequence 2:NP_173610.1 Gene:AT1G21920 / 838794 AraportID:AT1G21920 Length:417 Species:Arabidopsis thaliana


Alignment Length:174 Identity:63/174 - (36%)
Similarity:84/174 - (48%) Gaps:26/174 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 YIGGRNAA----GQRQGRG---WAILPNGDQYDGNYRKGRRHGIGVYVFKDGSRYYGQYRCGKRC 84
            ::.||...    |:..|.|   ||   .|.:|.|.||:|.|||.|||.|..|..|.|::..|:..
plant   197 FVRGRYEGDWLDGRYDGHGIESWA---RGSRYKGQYRQGLRHGFGVYRFYTGDCYAGEWFNGQSH 258

  Fly    85 GRGIFIYPDGSVYEGNWRKNLKHGKGRYKYVNGDNYSGDWFKGQRHGVGIYHFNSGKDGCCLSVR 149
            |.|:....|||.|.|..|..:|||.|.|.:.|||.|:|::|..:.||.|:|.|.:|.   |    
plant   259 GFGVQSCSDGSSYLGESRFGVKHGLGSYHFRNGDKYAGEYFGDKIHGFGVYRFANGH---C---- 316

  Fly   150 MKATWNSNMRTGPFELY-IGNEDKCTILHGIWDNLYPSGPAVFS 192
            .:..|:...:.| |..| ..|.|..:   |.||    ||..|.|
plant   317 YEGAWHEGRKQG-FGAYSFRNGDAKS---GEWD----SGVLVTS 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rsph1NP_609609.1 COG4642 <14..141 CDD:443680 48/120 (40%)
AT1G21920NP_173610.1 COG4642 <133..345 CDD:443680 57/161 (35%)

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