DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rsph1 and jph1b

DIOPT Version :10

Sequence 1:NP_609609.1 Gene:Rsph1 / 34712 FlyBaseID:FBgn0032478 Length:344 Species:Drosophila melanogaster
Sequence 2:NP_001037813.1 Gene:jph1b / 556485 ZFINID:ZDB-GENE-060616-389 Length:673 Species:Danio rerio


Alignment Length:337 Identity:80/337 - (23%)
Similarity:119/337 - (35%) Gaps:109/337 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 GLYIGGRNAAGQRQGRGWAILPNGD-QYDGNYRKGRRHGIGVYVFKDGSRYYGQYRCGKRCGRGI 88
            |.:.||.. .|:..|.|....|.|. :|.|::..| ...:|||.:..|:.|.|.:..|||.|.|:
Zfish    12 GTFCGGWE-DGKAHGHGICTGPKGQGEYSGSWSNG-FEVVGVYTWPSGNTYKGYWAQGKRHGLGV 74

  Fly    89 -----FIY--------------------PDGSVYEGNWRKNLKHGKGRYKYVNGDNYSGDWFKGQ 128
                 ::|                    |  :.|||.|...|:.|.|...|.:|..|.|.|..|.
Zfish    75 ESKGRWLYRGEWSHGFKGRYGVRQSLNTP--ARYEGTWSNGLQDGYGVETYGDGGTYQGQWMGGM 137

  Fly   129 RHGVGIYHFNSGKDGCCLSVRMKATWNSNMRTGPFELYIGNEDKCTILHGIWDNLYPS-----GP 188
            |||.|:.  .|...|....:|      |.:||....|. ..:...::||   |::..|     |.
Zfish   138 RHGYGVR--QSVPYGMATVIR------SPLRTSLASLR-SEQSNGSVLH---DHMSDSPAGTRGG 190

  Fly   189 AVFSFNNRYLLLGYFLPASYNMKAISNEDEMEDAEERLEDEMGEAEPMEPTLWFAQEMAVYDFSL 253
            .|.:|:                    ::.|:...:::.....|..                 |..
Zfish   191 FVLNFH--------------------SDSEVVSGKKKGLFRRGSL-----------------FGS 218

  Fly   254 LPQEPVPLAISDSELSVCSLSTEPSMRSEEKIS-----------WYGEGEEAEGEEGGEMECFPC 307
            |.|    |..|||..|:.  |...|.||:..:|           .:|:||.|:       |..|.
Zfish   219 LKQ----LRKSDSRSSIS--SKRSSARSDATMSRISSSDANSTISFGDGEVAD-------EYMPA 270

  Fly   308 ECDLTDVSEVET 319
            | |..|.:..|:
Zfish   271 E-DNVDATTTES 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rsph1NP_609609.1 COG4642 <14..141 CDD:443680 42/141 (30%)
jph1bNP_001037813.1 COG4642 <2..143 CDD:443680 40/134 (30%)
PLN03185 38..>342 CDD:215619 72/310 (23%)

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