DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rsph1 and jph2

DIOPT Version :9

Sequence 1:NP_609609.1 Gene:Rsph1 / 34712 FlyBaseID:FBgn0032478 Length:344 Species:Drosophila melanogaster
Sequence 2:NP_001082833.1 Gene:jph2 / 553333 ZFINID:ZDB-GENE-030131-9848 Length:781 Species:Danio rerio


Alignment Length:344 Identity:77/344 - (22%)
Similarity:123/344 - (35%) Gaps:106/344 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 GLYIGGRNAAGQRQGRG--------------------------WAILPNGDQYDGNYRKGRRHGI 63
            |.|.||.. .|:..|.|                          |   |:|:.|:|.:.:|:|||:
Zfish    12 GAYCGGWE-GGKAHGHGICTGPKGQGEFSGSWNYGFEVVGVYTW---PSGNTYEGYWSQGKRHGL 72

  Fly    64 GV-----YVFKDGSRYYGQYRCGKRCGRGIFIYPDGSVYEGNWRKNLKHGKGRYKYVNGDNYSGD 123
            ||     :::|....:..:.|.|.|..:|     .|:.|||.|...|:.|.|...|.:|..:.|.
Zfish    73 GVETKGHWIYKGEWTHGFKGRYGTRISQG-----SGAKYEGTWNNGLQDGYGTETYADGGTFQGQ 132

  Fly   124 WFKGQRHGVGIYHFNSGKDGCCLSVRMKATWNSNMRTGPFELYIGNEDKCTILHGIWDNLYPSGP 188
            :..|.|||.|:..        .:...|.|..:|.:|.....|...:.:...:...:        |
Zfish   133 FTGGMRHGYGVRQ--------SVPYGMAAVVHSPLRNSLSSLRSEHSNGTLLQQDV--------P 181

  Fly   189 AVFSFNNRYLLLGYFLPASYNMKAISNEDEMEDAEERLEDEMGEAEPMEPTL-WFAQEMAVYDFS 252
            .:.:.|    ..|...|.:..|                        |:.|:. .||..:.|...:
Zfish   182 VITTTN----ASGQETPVNLPM------------------------PLGPSRGGFALTLQVDPDA 218

  Fly   253 LLPQEP---------VPLAISDSELSVCSLSTEPS-MRSEEKISWYGEGE-------EAEGEEGG 300
            :.|::.         ..|..|||..|:.|..::.| :|:|..:|......       |:|||  |
Zfish   219 VKPKKSGLFRRGSFLGKLKKSDSRTSLSSQKSKISFLRTESALSSAASDANSTISLGESEGE--G 281

  Fly   301 EMECF-PCECDLTDVSEVE 318
            |...| |.|.|: |.:..|
Zfish   282 EGHNFPPVEADI-DATTTE 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rsph1NP_609609.1 MORN 51..73 CDD:280628 9/26 (35%)
MORN 72..93 CDD:197832 4/20 (20%)
MORN 95..116 CDD:197832 8/20 (40%)
MORN 118..137 CDD:197832 6/18 (33%)
jph2NP_001082833.1 MORN 106..128 CDD:280628 9/21 (43%)
MORN 324..346 CDD:280628
TonB_N 605..757 CDD:292650
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG4642
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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