DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rsph1 and Rsph1

DIOPT Version :9

Sequence 1:NP_609609.1 Gene:Rsph1 / 34712 FlyBaseID:FBgn0032478 Length:344 Species:Drosophila melanogaster
Sequence 2:NP_001012176.1 Gene:Rsph1 / 361818 RGDID:1307712 Length:300 Species:Rattus norvegicus


Alignment Length:325 Identity:115/325 - (35%)
Similarity:158/325 - (48%) Gaps:67/325 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 DLSAPEEEEDLGPNIGLYIGGRNAAGQRQGRGWAILPNGDQYDGNYRKGRRHGIGVYVFKDGSRY 74
            ||.:.|.||:...::|.|.|.||..|:|.|.|.|.|||||.|:|||..|:|||.|.|.||:|:||
  Rat     3 DLGSEELEEEGENDLGEYEGERNELGERHGHGKARLPNGDTYEGNYESGKRHGQGTYKFKNGARY 67

  Fly    75 YGQYRCGKRCGRGIFIYPDGSVYEGNWRKNLKHGKGRYKYVNGDNYSGDWFKGQRHGVGIYHF-N 138
            .|.|...|:.|:|.|:|||||.|||.|..:.:||.|.|.|||.|.|:|:||..||||.|.|.: .
  Rat    68 VGDYVKNKKHGQGTFVYPDGSRYEGEWADDQRHGHGVYYYVNNDTYTGEWFNHQRHGQGTYFYAE 132

  Fly   139 SGKDGCCLSVRMKATWNSNMRTGPFELYIGNEDKCTILHGIWDNLYPSGPAVFSFNNRYLLLGYF 203
            :|.       :...||....:.|..||...|..    ..|.:.|..|.||..:.|:         
  Rat   133 TGS-------KYVGTWVHGQQEGAAELIHLNHR----YQGKFINKNPVGPGKYVFD--------- 177

  Fly   204 LPASYNMKAISNEDEMEDAEERLED-EMGEAEPMEPTLWFAQEMAVYDFSLLPQEPVPLAISDSE 267
                     :..|   :..|.||.| |.||.|..|.||          .|::|:..   |:..:|
  Rat   178 ---------VGCE---QHGEYRLTDVERGEEEEEEETL----------VSIVPKWK---ALKITE 217

  Fly   268 LSVCSLSTEPSMRSEEKISWYGEG-EEAEGEEG-GEMECFPCECDLTDVSEVETESEVCKIDANP 330
            |::.:    |:: |||.....|:| ||.:|..| ||    |.:         :.::|..::||.|
  Rat   218 LALWT----PTL-SEEHPPAEGQGQEEVQGATGAGE----PSD---------DIQAEGFEVDAEP 264

  Fly   331  330
              Rat   265  264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rsph1NP_609609.1 MORN 51..73 CDD:280628 13/21 (62%)
MORN 72..93 CDD:197832 9/20 (45%)
MORN 95..116 CDD:197832 10/20 (50%)
MORN 118..137 CDD:197832 11/18 (61%)
Rsph1NP_001012176.1 COG4642 37..172 CDD:226989 60/135 (44%)
MORN 42..63 CDD:197832 12/20 (60%)
MORN 67..89 CDD:280628 11/21 (52%)
MORN 88..109 CDD:197832 10/20 (50%)
MORN 111..131 CDD:197832 11/20 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340336
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 150 1.000 Inparanoid score I4296
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1309439at2759
OrthoFinder 1 1.000 - - FOG0009514
OrthoInspector 1 1.000 - - oto95810
orthoMCL 1 0.900 - - OOG6_103378
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X7247
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.800

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