DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rsph1 and jp

DIOPT Version :10

Sequence 1:NP_609609.1 Gene:Rsph1 / 34712 FlyBaseID:FBgn0032478 Length:344 Species:Drosophila melanogaster
Sequence 2:NP_523525.2 Gene:jp / 34274 FlyBaseID:FBgn0032129 Length:1054 Species:Drosophila melanogaster


Alignment Length:170 Identity:47/170 - (27%)
Similarity:71/170 - (41%) Gaps:51/170 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 EEEEDLGPNIGLYIGGRNAAGQRQG---RGWAILPNGDQYDGNYRKGRRHGIGV----------- 65
            ::::..|.::..|...: |||.|:|   .|.....:|..|.|.:.:|:.||.||           
  Fly    22 QQQQQNGGDLAAYAASQ-AAGGRRGPINGGRFDFEDGGTYCGGWDEGKAHGHGVCTGPKHQGAYA 85

  Fly    66 ------------YVFKDGSRYYGQYRCGKRCGRGI-----FIY-----PDG-------------- 94
                        |::..||.|.||::.|:|.|.|:     .||     .||              
  Fly    86 GAWNYGFEVSGSYIWPSGSHYEGQWQNGRRHGLGVEQIGRQIYRGEWSKDGHKGRYGVRESTVST 150

  Fly    95 SVYEGNWRKNLKHGKGRYKYVNGDNYSGDWFKGQRHGVGI 134
            :.|||.|.:..:.|.|...|.:|..|.|.|.:|:|||.||
  Fly   151 AKYEGTWNEGYQDGSGCETYADGGKYQGQWQEGKRHGYGI 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rsph1NP_609609.1 COG4642 <14..141 CDD:443680 47/170 (28%)
jpNP_523525.2 COG4642 <49..194 CDD:443680 40/142 (28%)
PLN03185 84..>384 CDD:215619 31/107 (29%)

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