DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rsph1 and jp

DIOPT Version :9

Sequence 1:NP_609609.1 Gene:Rsph1 / 34712 FlyBaseID:FBgn0032478 Length:344 Species:Drosophila melanogaster
Sequence 2:NP_001188757.1 Gene:jp / 34274 FlyBaseID:FBgn0032129 Length:1054 Species:Drosophila melanogaster


Alignment Length:170 Identity:47/170 - (27%)
Similarity:71/170 - (41%) Gaps:51/170 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 EEEEDLGPNIGLYIGGRNAAGQRQG---RGWAILPNGDQYDGNYRKGRRHGIGV----------- 65
            ::::..|.::..|...: |||.|:|   .|.....:|..|.|.:.:|:.||.||           
  Fly    22 QQQQQNGGDLAAYAASQ-AAGGRRGPINGGRFDFEDGGTYCGGWDEGKAHGHGVCTGPKHQGAYA 85

  Fly    66 ------------YVFKDGSRYYGQYRCGKRCGRGI-----FIY-----PDG-------------- 94
                        |::..||.|.||::.|:|.|.|:     .||     .||              
  Fly    86 GAWNYGFEVSGSYIWPSGSHYEGQWQNGRRHGLGVEQIGRQIYRGEWSKDGHKGRYGVRESTVST 150

  Fly    95 SVYEGNWRKNLKHGKGRYKYVNGDNYSGDWFKGQRHGVGI 134
            :.|||.|.:..:.|.|...|.:|..|.|.|.:|:|||.||
  Fly   151 AKYEGTWNEGYQDGSGCETYADGGKYQGQWQEGKRHGYGI 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rsph1NP_609609.1 MORN 51..73 CDD:280628 9/44 (20%)
MORN 72..93 CDD:197832 10/30 (33%)
MORN 95..116 CDD:197832 7/20 (35%)
MORN 118..137 CDD:197832 9/17 (53%)
jpNP_001188757.1 PLN03185 46..>192 CDD:215619 40/145 (28%)
PLN03185 333..>388 CDD:215619
MORN 357..379 CDD:308220
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG4642
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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