DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rsph1 and jph-1

DIOPT Version :9

Sequence 1:NP_609609.1 Gene:Rsph1 / 34712 FlyBaseID:FBgn0032478 Length:344 Species:Drosophila melanogaster
Sequence 2:NP_492193.2 Gene:jph-1 / 266843 WormBaseID:WBGene00002179 Length:747 Species:Caenorhabditis elegans


Alignment Length:327 Identity:75/327 - (22%)
Similarity:118/327 - (36%) Gaps:69/327 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 GLYIGGRNAAGQRQGRGWAILPNGDQYDGNYRKGRRHGI---GVYVFKDGSRYYGQYRCGKRCG- 85
            |.|:||.. .|:..|.|   :..|.|..|.|.....:|.   |||.:..|:.|.||::.|||.| 
 Worm    12 GTYVGGWE-EGKAHGHG---VCTGPQAKGEYAGAWHYGFEVSGVYTWPSGNTYQGQWQNGKRHGL 72

  Fly    86 ----RGIFIYP------------------DGSVYEGNWRKNLKHGKGRYKYVNGDNYSGDWFKGQ 128
                ||.::|.                  ..:.|:|.|......|.|...||:..:|.|.|.:|.
 Worm    73 GIEQRGRWLYKGEWTQGYKGRYGVRQSANSQARYQGTWSAGFHDGYGTEIYVDSGSYQGQWLRGM 137

  Fly   129 RHGVGIYHFNSGKDGCCLSVRMKATWN---SNMRTGPFELYIGNEDKCTILHGIWDNLYPSGPAV 190
            |||.||....:.:...  ..|.|:..:   :::|:|..|     |:.....|...:.|...|..|
 Worm   138 RHGYGIRKSTTYEKAA--KFRSKSQTHASLTSLRSGRVE-----EENAAEEHRHKEGLSGRGGFV 195

  Fly   191 FSFNN------------------RYLLLGYFLPASYNMKAISNEDEMEDAEERLEDEMGEAEPME 237
            ...|:                  |.||.|.         .|..:....|..:|:....|......
 Worm   196 LRANSSAPQRRRRSLSERSLAVKRTLLSGL---------RIKKQHSTGDIHQRVASMTGSLRSSG 251

  Fly   238 PTLWFAQEMAVYDFSLLPQEPVPLAISDSELSVCSLSTEPSMRSEEKISWYGEGEEAEGEEGGEM 302
            .|:....|.:::...|  |:|...|:.:|.:.......:..|||...:....:|.:.:||.....
 Worm   252 STMSCTSEDSLHHHGL--QQPEEEAVEESSIETYMGEWKNDMRSGFGVCERSDGLKYQGEWANNA 314

  Fly   303 EC 304
            :|
 Worm   315 KC 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rsph1NP_609609.1 MORN 51..73 CDD:280628 7/24 (29%)
MORN 72..93 CDD:197832 10/43 (23%)
MORN 95..116 CDD:197832 6/20 (30%)
MORN 118..137 CDD:197832 9/18 (50%)
jph-1NP_492193.2 MORN 58..>74 CDD:197832 7/15 (47%)
MORN 283..303 CDD:280628 3/19 (16%)
MORN 306..328 CDD:280628 3/11 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG4642
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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