DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5439 and AT2G15900

DIOPT Version :10

Sequence 1:NP_609607.1 Gene:CG5439 / 34710 FlyBaseID:FBgn0032476 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_179190.3 Gene:AT2G15900 / 816086 AraportID:AT2G15900 Length:994 Species:Arabidopsis thaliana


Alignment Length:552 Identity:112/552 - (20%)
Similarity:187/552 - (33%) Gaps:187/552 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 FRRLQESAHKISQKFSGKELATERDESVQELCESLEELMSYGLRQSAGTSSFSAASFIQNMQEMV 99
            |||.|.:......|....|   ||||.::      ..||:.|....|   ..|..|..:.:|::|
plant   181 FRRNQAAIGTDVMKTLSSE---ERDERLK------YHLMASGELYPA---LVSPESEYKVLQKIV 233

  Fly   100 SGNAGGGSNNNDATFWEFCQTHLTPHERQ---------------------------RYMDLKQIW 137
            :|               .....|.|.|.|                           |..::.:|.
plant   234 AG---------------ILSVVLRPREAQCPLVRTIAREIVTCLVIQPLLNLACPERINEVFEII 283

  Fly   138 TNVGRGRAFIRATLNEKRLHSHVLTWLSDEEQLHRFYTPWSLLLNDEAAKKLPEIVDSLSDVLFA 202
            .|:.:...|.:.|..|:.::|..|:....:.:        ::.|.....:|.|.|.|...|    
plant   284 INLIKEGNFEQFTAEEQNVNSAPLSAFDSQAK--------NMNLTKAIEQKSPNINDRHPD---- 336

  Fly   203 LNVDTTELNAPRRSTPSVAVKEEPIIFTTSPVPVVGRQKRPGIAVERPIECVSSTEDLLGALKPI 267
                   |:..:.|.......|            |..|:|  ..|.||    .:.|::....:..
plant   337 -------LHVQQHSADWARSLE------------VATQRR--TEVLRP----ENLENMWTKGRNY 376

  Fly   268 ESVEVQQILSKESI----EQELAQPQEEVNLGPFDPIEPELEFLKTPLPDIGAHVGESEL-YEDR 327
            :..|.::.|.|.|.    |..:||...:|:.......:...||.|:.|.|.|..:.|::: .|.|
plant   377 QKKEYKKSLKKGSSTGAKENAVAQLPPKVSTDKQSQAQMAEEFSKSSLHDGGHQIYEADVRKESR 441

  Fly   328 SDTSSQWSKSSSSA-----------------------------------NCLANSQQQAALEEHV 357
            ||.:....|.|:|.                                   |.:::::.|:.:   :
plant   442 SDGNKNRLKRSNSTSDLNLRPETSLALLGVSEGPLITEFYTTDFIKHNDNYISDNKSQSIV---L 503

  Fly   358 NQLNERCALLETRVAELSLQNRLLIRRLTKQFEETGIDPSSSLCSNFLITIPHVKLAKTQRSGSH 422
            ::..:.|..|:.||             |...||:.|                         |.|.
plant   504 HKEGQHCLKLKCRV-------------LGAYFEKQG-------------------------SKSF 530

  Fly   423 YTYEVHITMRQRLEHWTFF--RRYSEFYKLHKSLLKTHPVVSAVEFPPKKHFGNMNL-VFVEERR 484
            ..|.:.:|   .:|:.|:|  ||||.|.:||:. ||..|..: ::.|||:.|.:... .||..|.
plant   531 AVYSIAVT---DVENKTWFVKRRYSNFERLHRQ-LKEIPNYN-LQLPPKRIFSSSTEDAFVHRRC 590

  Fly   485 QQLQIYLLNLVETLPQVEACKSKAELQKVFPF 516
            .||..||.:|:       ...:.||..:|:.|
plant   591 IQLDKYLQDLL-------CIANVAEQHEVWDF 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5439NP_609607.1 RUN 37..206 CDD:459241 35/195 (18%)
PX_RUN 404..520 CDD:132810 33/116 (28%)
AT2G15900NP_179190.3 PXA 105..286 CDD:460484 25/131 (19%)
PX_SNX19_like_plant 513..619 CDD:132782 40/153 (26%)
Nexin_C 815..955 CDD:462541
Blue background indicates that the domain is not in the aligned region.

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