DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5439 and Snx24

DIOPT Version :9

Sequence 1:NP_609607.1 Gene:CG5439 / 34710 FlyBaseID:FBgn0032476 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001357690.1 Gene:Snx24 / 69226 MGIID:1916476 Length:169 Species:Mus musculus


Alignment Length:145 Identity:39/145 - (26%)
Similarity:61/145 - (42%) Gaps:39/145 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   406 ITIPHVKLAKTQRSGSHYTYEVHITMRQRLEHWTFFRRYSEFYKLHKSLLKTHPVVSAVEFP--P 468
            :.||..:...:.....:..:::.:.|..| :|:. .:|||||:.|||.|.|      .::.|  |
Mouse     3 VYIPSFRHEDSDLERGYTVFKIEVLMNGR-KHFV-EKRYSEFHALHKKLKK------CIKTPEIP 59

  Fly   469 KKHFGNMNLVFVEERRQQLQIYL-----------------LNL--VETLPQVEAC---------- 504
            .||..|.....:|:|||.|:.||                 ||:  :.:||:.|:|          
Mouse    60 SKHVRNWVPKVLEQRRQGLETYLQAVILENEELPKLFLDFLNVRHLPSLPKAESCGSFDETESEE 124

  Fly   505 KSKAELQKVFPFFRD 519
            .||...|.|..|..|
Mouse   125 SSKLSHQPVLLFLGD 139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5439NP_609607.1 RUN 64..206 CDD:280855
PX_RUN 404..520 CDD:132810 39/145 (27%)
Snx24NP_001357690.1 PX_SNX22 1..111 CDD:132790 31/115 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2101
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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