DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5439 and Snx29

DIOPT Version :9

Sequence 1:NP_609607.1 Gene:CG5439 / 34710 FlyBaseID:FBgn0032476 Length:520 Species:Drosophila melanogaster
Sequence 2:XP_038942785.1 Gene:Snx29 / 689142 RGDID:1596162 Length:838 Species:Rattus norvegicus


Alignment Length:786 Identity:168/786 - (21%)
Similarity:272/786 - (34%) Gaps:313/786 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 RREDIFRRLQESAHKISQKFSG-KELATERDESVQELCESLEELMSYGLRQSAGTSSFSAASFIQ 93
            ||:.:..||.::..:...:|.| ||:|::.|..|..||...|.::.:|:::|.|.:..:||    
  Rat    29 RRQFLLERLLDAVKQCQIRFGGRKEIASDSDSRVTCLCAQFEAVLQHGMKRSRGLALTAAA---- 89

  Fly    94 NMQEMVSGNAGGGS-NNNDATFWEFCQTHLTPHERQRYMDLKQIWTNVGRGRAFIRATLNEKRLH 157
                 :...||..| ...:..||.:.:..|:.||.||:..|..|..:||||||::|..|||..|.
  Rat    90 -----IKQAAGFTSKTETEPVFWVYVKEVLSKHELQRFYSLHHITADVGRGRAWLRCALNEHSLE 149

  Fly   158 SHVLTWLSDEEQLHRFYTPWSLLLNDEAAKKLPEIVDSLSDVLFALNVDTTELNAPRRSTPSVA- 221
            .::...|:|..:|..||..||.::::|.:..||.:...|:.:|||:|:|..:||...:..|:|: 
  Rat   150 RYLHMLLADRTRLSTFYEDWSFVMDEERSSMLPTMAAGLNSILFAINIDNKDLNGQSKFAPTVSD 214

  Fly   222 -VKEEPIIFT--------------------------------TSPVPVVGR-------------- 239
             :||.....|                                |.|:||:.:              
  Rat   215 LLKESTQNMTSLLKESTQGMSSLLREITASSAVSILIKPEQETDPLPVISKNVHVDARCKRERRR 279

  Fly   240 -----------------------QKRPGIAVERPIECVSSTEDLLGALK---------------- 265
                                   :|.||.|.........|:.:::.|.:                
  Rat   280 RKKVTNIVSFDDDDEEQGAGDTLKKMPGTAESSEENSDRSSVNIMAAFEGPFGPNSNGSQSSNSW 344

  Fly   266 PIESVEVQ-----QILSKESIEQELAQPQEEVNLGPFD--------------------------- 298
            .::|..:.     |.|..:||:.::.:.:|.|...|..                           
  Rat   345 KMDSASLNGELGYQKLDVKSIDDDVDESEEAVYRNPLGRGHTGHKESPDRTLDGNASLPQVHGWA 409

  Fly   299 ------------------------------PI---------------EPELEFLKTPLPDIG--- 315
                                          |:               ||.|.:.:...|..|   
  Rat   410 PLQVLHGDADADTDILFPVSGVGSYGTADAPVGSLENGTGTEDHILPEPGLRYREAGSPGRGSPL 474

  Fly   316 ------AHVGES----ELYE------DRSDTSSQWSKSSSSANCL--------ANSQQQAALEEH 356
                  |.|.||    ||.:      :|.|...:  ::.|..|.|        |..|:..||...
  Rat   475 SSLLPSASVPESMTVHELRQAIVAMMNRKDELEE--ENGSLRNLLDGEMEHSAALRQEVDALRRK 537

  Fly   357 VNQLNERCALLETRVAELSLQNRLLIRRLTK---------------------------------- 387
            |.:..||.|   |:|..|:.:|.:|..:|.|                                  
  Rat   538 VTEQQERHA---TKVQALARENEVLKVQLKKYVGAVQMLKREGQTAEVVPSLWNVDAEVTVPEQK 599

  Fly   388 ---------------------------QFEE---------------------------------T 392
                                       :|.|                                 |
  Rat   600 PGEVAEELASSYERKLIEVAEMHGELIEFNERLHRALVAKEALVSQMRQELIDLRGPVPGDLSQT 664

  Fly   393 GIDPSSS---LCSNFLIT--IPHVKLAKTQRSGSHYTYEVHITMRQRLEHWTFFRRYSEFYKLHK 452
            ..|.|.|   :.:..||.  ||.|.| :.:.:.:::.|:|:|.::.  :.|..:|||:||..||.
  Rat   665 SEDQSLSDFEISNRALINVWIPSVFL-RGKAANAYHVYQVYIRIKD--DEWNVYRRYTEFRGLHH 726

  Fly   453 SLLKTHPVVSAVEFPPKKHFGNMNLVFVEERRQQLQIYLLN----LVETLPQVEACKSKAELQKV 513
            .|....|.|.|..|||||..||.:..||||||:|||.||.:    :::.:|:..|...|..|.::
  Rat   727 QLQSAFPQVRAYSFPPKKAIGNKDAKFVEERRKQLQSYLRSVMNKVIQMVPEFAANPKKETLVQL 791

  Fly   514 FPFFRD 519
            .|||.|
  Rat   792 VPFFVD 797

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5439NP_609607.1 RUN 64..206 CDD:280855 46/142 (32%)
PX_RUN 404..520 CDD:132810 47/122 (39%)
Snx29XP_038942785.1 RUN 64..197 CDD:397055 45/141 (32%)
COG1340 489..654 CDD:224259 24/169 (14%)
PX_RUN 681..798 CDD:132810 46/120 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 89 1.000 Domainoid score I7717
eggNOG 1 0.900 - - E1_KOG2101
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 196 1.000 Inparanoid score I3739
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250381at33208
OrthoFinder 1 1.000 - - FOG0006133
OrthoInspector 1 1.000 - - oto95952
orthoMCL 1 0.900 - - OOG6_107516
Panther 1 1.100 - - LDO PTHR47194
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X5870
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.870

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