DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5439 and snx21

DIOPT Version :10

Sequence 1:NP_609607.1 Gene:CG5439 / 34710 FlyBaseID:FBgn0032476 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001070836.1 Gene:snx21 / 555580 ZFINID:ZDB-GENE-061013-557 Length:395 Species:Danio rerio


Alignment Length:239 Identity:51/239 - (21%)
Similarity:87/239 - (36%) Gaps:51/239 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   282 EQELAQPQEEVNLGPFDPIEPELEFLKTPLPDIGAHVGESELY--------EDRSDTSSQWSKSS 338
            |.||:...:......|    ||...|:..:..:.|.:|.:..:        ||..|.|...|.|.
Zfish    16 EGELSSESDGQGTDDF----PESSELEDDIDCVSARLGGTLCFEADGVLDSEDAGDVSGPDSDSD 76

  Fly   339 SSANCLANSQQQAALEEHVNQLNERCALLETR-VAELSLQNRLLIRRLTKQFEETGIDPSSSLCS 402
            .....:.|:                |:..||. :......:.:|.|:|.:.:..     |.:.|.
Zfish    77 FFGESIDNA----------------CSSTETSPIGPSPKSSNMLTRQLQENWRN-----SRARCV 120

  Fly   403 NFLITIPHVKLAKTQRSGSHYT-YEVHITMRQRLEHWTF-------FRRYSEFYKLHKSLLKTH- 458
            ...:.......:....:.|.|. |.:|:     :...||       .|||::|.:|| |.|:.| 
Zfish   121 PEKLIFEVTDASVVHETNSKYVLYTIHV-----IHAGTFDKTPAVITRRYTDFERLH-SRLRRHY 179

  Fly   459 -PVVSAVEFPPKKHFGNMNLVFVEERRQQLQIYLLNLVETLPQV 501
             ..:..|.||.||...|.....:.:|.:..:.||.:| .:||.:
Zfish   180 GGNIDGVYFPRKKLRKNFAAETIAKRSRAFEQYLTHL-HSLPDL 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5439NP_609607.1 RUN 37..206 CDD:459241
PX_RUN 404..520 CDD:132810 27/108 (25%)
snx21NP_001070836.1 PX_SNX21 124..235 CDD:132834 27/106 (25%)
Blue background indicates that the domain is not in the aligned region.

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