DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5439 and snx13

DIOPT Version :9

Sequence 1:NP_609607.1 Gene:CG5439 / 34710 FlyBaseID:FBgn0032476 Length:520 Species:Drosophila melanogaster
Sequence 2:XP_021323912.1 Gene:snx13 / 503733 ZFINID:ZDB-GENE-050306-12 Length:966 Species:Danio rerio


Alignment Length:211 Identity:51/211 - (24%)
Similarity:84/211 - (39%) Gaps:60/211 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   303 ELEFLKTPLPDIGAHVGESELYEDRSDTSSQWSKSSSSANCLANSQQQAALEEHVNQLNERCALL 367
            ||:.||.|          |....|..|..|.....:.|.|...:.....:::|.| ||:  ..:.
Zfish   517 ELDMLKEP----------SYRGSDDGDGESFNGSPTGSINLSLDDLSSGSVDESV-QLH--AFIS 568

  Fly   368 ETRVAELSLQNRLLIRRLTKQFEETGIDPSSSLCSN-------FLITIPHVKLAKTQRSGSHYTY 425
            :|..|.|   |.|               |.:.:|::       :.||:     .:....||..| 
Zfish   569 DTADAFL---NPL---------------PVAGVCNDHGKTYALYTITV-----IRKNSDGSEDT- 609

  Fly   426 EVHITMRQRLEHWTFFRRYSEFYKLHKSLLKTHPVVSAV-EFPPKKHFGNMNLVFVEERRQQLQI 489
                        |..:||||:|:..|..:.:....::.: :.|.||.|.||:..|:|:|::.|..
Zfish   610 ------------WKTYRRYSDFHDFHMRITEQFESLAPILKLPGKKTFNNMDREFLEKRKKDLNA 662

  Fly   490 YLLNLVETLPQ-VEAC 504
            ||..|:.  |: |:||
Zfish   663 YLQLLLN--PEMVKAC 676

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5439NP_609607.1 RUN 64..206 CDD:280855
PX_RUN 404..520 CDD:132810 29/103 (28%)
snx13XP_021323912.1 PXA 98..284 CDD:321992
RGS 378..513 CDD:321993
PX_SNX13 559..690 CDD:132783 40/159 (25%)
Nexin_C 806..915 CDD:312222
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2101
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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