DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5439 and rundc3b

DIOPT Version :10

Sequence 1:NP_609607.1 Gene:CG5439 / 34710 FlyBaseID:FBgn0032476 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001007417.1 Gene:rundc3b / 492775 ZFINID:ZDB-GENE-041114-121 Length:450 Species:Danio rerio


Alignment Length:359 Identity:78/359 - (21%)
Similarity:142/359 - (39%) Gaps:100/359 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 FSG-KELATERDESVQE-----LCE-SLEELMSYGLRQSAGTSSFSAASFIQNMQEMVS----GN 102
            ||| ::.|..|..:|:.     :|. |::.|:.....::...:|....:|:..::.::|    |.
Zfish     8 FSGARKKAAARIRAVERRNLITVCRFSVKTLIDRSCFETIDDTSAEFINFVSILEHILSHRLKGQ 72

  Fly   103 AGGGSNNNDATFWEFCQTHLT--PHERQRYMD-LKQIWTNVGRGRAFIRATLNEKRLHSHVLTWL 164
            .......:..:||:|.:...:  ||.....:: ::.:.::..:|||:||..|.||||..::...|
Zfish    73 VSWFGYESPRSFWDFIRMACSKVPHSCIHSIENMENVRSSRAKGRAWIRVALMEKRLSEYISAAL 137

  Fly   165 SDEEQLHRFYTPWSLLLNDEAAKKLPEIVDSLSDVLFALN-VDTTELNAPRRSTPSVAVKEE--- 225
            .|.:...|||...:|||.:||.        .|:|.|..|| :|.           |..:|.|   
Zfish   138 RDFKTTRRFYEEGALLLGEEAG--------LLADTLIGLNAIDF-----------SFCLKGEGLD 183

  Fly   226 ---PIIFTTSPVPVVGRQKRPGIAVERPIECVSSTEDLLGALKPIESVEVQQILSKESIEQELAQ 287
               |::...:|.          :...:..:.:||.|:           |::.:.|..|   |...
Zfish   184 EDCPVVIDYTPY----------LKFTQTSDSISSDEE-----------EMRTLGSSGS---EAGT 224

  Fly   288 PQEEVNLGPFDPIEPELEFLKTPLPDIGAHVGESELYEDRSDTSSQWSKSSSSANCLANSQQQAA 352
            |:                          :|:..|.:    :|.||.:|||...      .|:...
Zfish   225 PE--------------------------SHMAASLM----ADQSSWFSKSKRL------EQKYRV 253

  Fly   353 LEEHVNQLNERCALLETRVAELSLQNRLLIRRLT 386
            :.|....|.|...|.|.:::|...||:.|::|||
Zfish   254 VLEQRGYLEELVRLREAQLSESVSQNKALLQRLT 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5439NP_609607.1 RUN 37..206 CDD:459241 43/171 (25%)
PX_RUN 404..520 CDD:132810
rundc3bNP_001007417.1 RUN_RUNDC3B 26..176 CDD:439062 39/168 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 203..225 7/35 (20%)
Blue background indicates that the domain is not in the aligned region.

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