Protein Alignment CG5439 and Snx13

DIOPT Version :10

• Sequence 1: NP_609607.1
• Gene: CG5439 / 34710
• FlyBaseID: FBgn0032476
• Length: 520
• Species: Drosophila melanogaster
• Sequence 2: XP_006240084.1
• Gene: Snx13 / 362731
• RGDID: 1309778
• Length: 1144
• Species: Rattus norvegicus
• Alignment Length: 594
• Identity: 109/594 - (18%)
• Similarity: 216/594 - (36%)
• Gaps: 184/594 - (30%)

  Fly    34 IFRRLQESAHKISQKFSGKELATERDESVQELCESL--------EELMSYGLRQSAGTSSFSAAS 90
            :||:.|:.             .||:|:.|:...|.|        .|:.....|....||......
  Rat   347 VFRKAQQR-------------VTEKDDQVKGTAEDLVETFFEVEVEMEKDVCRDLVCTSPKDEEG 398

  Fly    91 FIQNMQEMVSGNAGGGSNNNDATFWEFCQTHLTPHERQ-RYMDLKQIWTNVGRGRAFIRATLNEK 154
            |::::.|::                  ....|.|.:.| :.|            |.|:|..| .:
  Rat   399 FLRDLCEVL------------------LYLLLPPGDFQSKIM------------RYFVREIL-AR 432

  Fly   155 RLHSHVLTWLSDEEQLHRFYTPWSLL---LNDEAAKKLPEIVDSLSDV-------------LFAL 203
            .:...::..|||.:.::: |..|.:.   .|.||...:.::.|::.::             |.:|
  Rat   433 GILLPLINQLSDPDYINQ-YVIWMIRDSNCNYEAFMNIIKLSDNIGELEAVRDKAAEELQYLRSL 496

  Fly   204 NVDTTELNAPRRSTPSVAVKEEPIIFTTSPVPVVGRQKRPGIAVERPIECVSSTEDL-------- 260
            :....::|..:....|       ::|...             ..:..|:.:.|.:::
  Rat   497 DTAGDDINTIKNQINS-------LLFVKK-------------VCDSRIQRLQSGKEINTVKLAAN 541

  Fly   261 LGAL--KPIESVEVQQILSKESIEQELAQPQEEVNLGPFDPIE-------PELEFLKTPLPDIGA 316
            .|.|  .|::|:.|..: :.:.....:.|...:.:|..:..:|       .:||.|.:...|...
  Rat   542 FGKLCTVPLDSILVDNV-ALQFFMDYMQQTGGQAHLFFWMTVEGYRVTAQQQLEVLSSRQRDGKQ 605

  Fly   317 HVGESE---------LYEDRSDTSSQWSKSSSSANCLANSQQQAALEEHVNQLNERCAL---LET 369
            ...:::         :||       |:....:|...:.:....|.|.:.:|..:....:   ::.
  Rat   606 QTNQTKGLLRAAAVGIYE-------QYLSEKASPRVIVDDYLVAKLADTLNHEDPTPEIFDDIQR 663

  Fly   370 RVAELSL----------QNRLLIRRLTK--------------------QFEETG-----IDPSSS 399
            :|.||.|          ||.|.:|.|.:                    ....||     :|..||
  Rat   664 KVYELMLRDERFYPSFRQNPLYVRMLAELDMLKDPSFRGSDDGDGESFNGSPTGSINLSLDDLSS 728

  Fly   400 LCSNFLITIPHVKLAKTQRS-----------GSH-YTYEVH-ITMRQRL----EHWTFFRRYSEF 447
            :.|:..:.: |..::.|..:           ..| .||.:: ||:.:|.    |.|..:||||:|
  Rat   729 VTSDDSVQL-HAYISDTVYADYDPYAVAGVCNDHGKTYALYAITVHRRSLNTEEMWKTYRRYSDF 792

  Fly   448 YKLHKSLLKTHPVVSAV-EFPPKKHFGNMNLVFVEERRQQLQIYLLNLVETLPQVEACKSKAELQ 511
            :..|..:.:....:|:: :.|.||.|.||:..|:|:|::.|..| |.|:.|...::|  |.|...
  Rat   793 HDFHMRITEQFENLSSILKLPGKKTFNNMDRDFLEKRKKDLNAY-LQLLLTPEMLKA--SPALAH 854

  Fly   512 KVFPFFRDR 520
            .|:.|..::
  Rat   855 CVYDFLENK 863

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5439	NP_609607.1	RUN	37..206	CDD:459241	32/193 (17%)
		PX_RUN	404..520	CDD:132810	36/133 (27%)
Snx13	XP_006240084.1	PHA03307	<2..>145	CDD:223039
		PXA	273..460	CDD:470618	28/157 (18%)
		RGS_SNX13	553..687	CDD:188674	22/141 (16%)
		PX_SNX13	733..863	CDD:132783	36/133 (27%)
		Nexin_C	979..1087	CDD:462541