DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5439 and Snx24

DIOPT Version :10

Sequence 1:NP_609607.1 Gene:CG5439 / 34710 FlyBaseID:FBgn0032476 Length:520 Species:Drosophila melanogaster
Sequence 2:XP_063133546.1 Gene:Snx24 / 361328 RGDID:1306864 Length:176 Species:Rattus norvegicus


Alignment Length:145 Identity:39/145 - (26%)
Similarity:61/145 - (42%) Gaps:39/145 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   406 ITIPHVKLAKTQRSGSHYTYEVHITMRQRLEHWTFFRRYSEFYKLHKSLLKTHPVVSAVEFP--P 468
            :.||..:...:.....:..:::.:.|..| :|:. .:|||||:.|||.|.|      .::.|  |
  Rat     3 VYIPSFRHEDSDLERGYTVFKIEVLMNGR-KHFV-EKRYSEFHALHKKLKK------CIKTPEIP 59

  Fly   469 KKHFGNMNLVFVEERRQQLQIYL-----------------LNL--VETLPQVEAC---------- 504
            .||..|.....:|:|||.|:.||                 ||:  :.:||:.|:|          
  Rat    60 SKHVRNWVPKVLEQRRQGLETYLQAVILENEELPKLFLDFLNVRHLPSLPKAESCGSFDETESEE 124

  Fly   505 KSKAELQKVFPFFRD 519
            .||...|.|..|..|
  Rat   125 SSKLSHQPVLLFLGD 139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5439NP_609607.1 RUN 37..206 CDD:459241
PX_RUN 404..520 CDD:132810 39/145 (27%)
Snx24XP_063133546.1 None
Blue background indicates that the domain is not in the aligned region.

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