DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5439 and Snx21

DIOPT Version :10

Sequence 1:NP_609607.1 Gene:CG5439 / 34710 FlyBaseID:FBgn0032476 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_608709.1 Gene:Snx21 / 33466 FlyBaseID:FBgn0031457 Length:326 Species:Drosophila melanogaster


Alignment Length:134 Identity:33/134 - (24%)
Similarity:59/134 - (44%) Gaps:25/134 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   372 AELSLQNRLLIRRLTKQFEETGIDPSSSLCSNFLITIPHV-----KLAKTQRSGSHYTYEVHI-- 429
            ::.:||..:..|..:.:::.| .|.|:.|  .|.|.:.|:     :..|.:|   ...||:.:  
  Fly    44 SDKALQKGVWERATSAEYKPT-TDGSTVL--RFDILLAHIMPPDGEDVKIKR---FVVYELTVKQ 102

  Fly   430 ------TMRQRLEHWTFFRRYSEFYKLHKSLLKTHPVVSAVE-FPPKKHFGNMNLVFVEERRQQL 487
                  |...::|     |||::|.:|:..|.:.||...|.: ||.|...||.....:.||....
  Fly   103 DGATEDTQPAKIE-----RRYTDFRELYLGLKRQHPAEMANKYFPAKVLMGNFKSELIGERSAAF 162

  Fly   488 QIYL 491
            :.:|
  Fly   163 EAFL 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5439NP_609607.1 RUN 37..206 CDD:459241
PX_RUN 404..520 CDD:132810 26/102 (25%)
Snx21NP_608709.1 PX_SNX20_21_like 71..188 CDD:132812 27/106 (25%)
Blue background indicates that the domain is not in the aligned region.

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