DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5439 and Snx14

DIOPT Version :10

Sequence 1:NP_609607.1 Gene:CG5439 / 34710 FlyBaseID:FBgn0032476 Length:520 Species:Drosophila melanogaster
Sequence 2:XP_063121634.1 Gene:Snx14 / 315871 RGDID:1310921 Length:985 Species:Rattus norvegicus


Alignment Length:396 Identity:82/396 - (20%)
Similarity:127/396 - (32%) Gaps:128/396 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   164 LSDEEQLHRFYTPWSLLLNDEAAKKL---PEIVDSLSDVLFALNVDTTELNAPR----------- 214
            ||..|:|.:.|..:.|   ||:..|:   |.||:.:..:.....:|..:|...|           
  Rat   414 LSLHEELQKIYKTYCL---DESIDKIRFDPFIVEEIQRIAEGPYIDVVKLQTMRCLFEAYEHVLS 475

  Fly   215 ----RSTPSVAVKEEPIIFTTSPVPVVGRQKRPGIAVERPIECVS------STEDLLGALKPIES 269
                ..||.....:|..           ||...|  .|.|.....      |.:|.....|..||
  Rat   476 LLENVFTPMFCHSDEYF-----------RQLLRG--AESPTRNSKFNRGSLSLDDFRSTQKRGES 527

  Fly   270 VEVQQILSKESIEQELAQPQEEVNLGPFDPIEPELEFLKTPLPDIGAHVGESELYEDRSDTSSQW 334
            ..:.:|.||..              |.|.....|    ...||..|...||.:.           
  Rat   528 FGISRIGSKIK--------------GVFKSTTME----GAVLPSYGVAEGEDDF----------- 563

  Fly   335 SKSSSSANCLANSQQQAALEEHVNQLNERCALLETRVAELSLQN---RLLIRRLTKQFEETGIDP 396
                              :||.:..|.:     ::.|..:|..|   .|...:::..:.:...||
  Rat   564 ------------------IEEGIVVLED-----DSPVEAVSTPNTPRNLAAWKISIPYVDFFEDP 605

  Fly   397 SSSLCSN------FLITIPHVKLAKTQRSGSHYTYEVHITMRQRLEHWTFFRRYSEFYKLHKSLL 455
            ||.....      |.|.:..    ..:|:..|           ..|||:.:|||.|||.|...|.
  Rat   606 SSERKEKKERIPVFCIDVER----NDRRAVGH-----------EPEHWSVYRRYLEFYVLESKLT 655

  Fly   456 KTHPVVSAVEFPPKKHFGNMNLVFVEERRQQLQIYLLNLVETLPQVEACKSKAE----------- 509
            :.|......:.|.|:..|..|..|::.:|::.|.||..||:. |::...:..|:           
  Rat   656 EFHGTFPDAQLPSKRIIGPKNYEFLKSKREEFQEYLQKLVQH-PELSNSQLLADFLSPNGGETQF 719

  Fly   510 LQKVFP 515
            |.|:.|
  Rat   720 LDKILP 725

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5439NP_609607.1 RUN 37..206 CDD:459241 12/44 (27%)
PX_RUN 404..520 CDD:132810 32/123 (26%)
Snx14XP_063121634.1 None

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